RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 PBOV1Q9GZY1 135 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 NIPAL2Q9H841 368 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 RNF122Q9H9V4 155 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 ABCB10Q9NRK6 738 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC7A10Q9NS82 523 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC5A6Q9Y289 635 aa16.52■□□□□ 0.23
CHRNA4-203ENST00000467563 ANKRD11Q6UB99 2663 aaPredicted RBP16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 A0A0B4J203 849 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 K7EM74 188 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 TTRP02766 147 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 CCDC92Q53HC0 331 aaPredicted RBP16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF704Q6ZNC4 412 aaPredicted RBP16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 ELMOD2Q8IZ81 293 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 FOXB1Q99853 325 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 PARPBPQ9NWS1 579 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 DHDHQ9UQ10 334 aa16.51■□□□□ 0.23
CHRNA4-203ENST00000467563 P2RY10O00398 339 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 YES1P07947 543 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 ACSM4P0C7M7 580 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC2A1P11166 492 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 MADCAM1Q13477 382 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 CNIH2Q6PI25 160 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 HHLA2Q9UM44 414 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 FABP12A6NFH5 140 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 PDCD5O14737 125 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 UBCP0CG48 685 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 ACHEP22303 614 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 APEX1P27695 318 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 EVX1P49640 407 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF121P58317 390 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 GRB2P62993 217 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 GALK2Q01415 458 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 FAM131AQ6UXB0 335 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 TRMT10AQ8TBZ6 339 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 LINC00470Q9BZP3 86 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 PRDM14Q9GZV8 571 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 SLITRK2Q9H156 845 aa16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 NUFIP1Q9UHK0 495 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-203ENST00000467563 A0A1B0GVC2 190 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC22A20A6NK97 555 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 IFITM5A6NNB3 132 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 KRT33AO76009 404 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 MAS1P04201 325 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 CST2P09228 141 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SNRPBP14678 240 aaKnown RBP16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 ELK1P19419 428 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 EIF2S3P41091 472 aaKnown RBP16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 CX3CR1P49238 355 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 RSPO1Q2MKA7 263 aaPredicted RBP16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 TMEM244Q5VVB8 128 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 Q6ZS92 163 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 NUFIP2Q7Z417 695 aaKnown RBP16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 LYSMD2Q8IV50 215 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SIAH3Q8IW03 269 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 MCEMP1Q8IX19 187 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC22A24Q8N4F4 322 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SAMD12Q8N8I0 201 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 DNAAF1Q8NEP3 725 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 OR5H6Q8NGV6 325 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 THRSPQ92748 146 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SOSTQ9BQB4 213 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SRRQ9GZT4 340 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF319Q9P2F9 582 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 V9GY05 133 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 FREM1Q5H8C1 2179 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 LMX1BO60663 402 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 AZGP1P25311 298 aaKnown RBP16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 CTSSP25774 331 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 ELFN2Q5R3F8 820 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 HES5Q5TA89 166 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 STEAP3Q658P3 488 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 OR13C3Q8NGS6 347 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 N6AMT1Q9Y5N5 214 aa16.49■□□□□ 0.23
CHRNA4-203ENST00000467563 SPTBN4Q9H254 2564 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 ARPC4-TTLL3A0A0A6YYG9 625 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 AIPO00170 330 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 AQP7O14520 342 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC19A2O60779 497 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 PATE4P0C8F1 98 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF181Q2M3W8 571 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 RGS21Q2M5E4 152 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 PRSS45Q7RTY3 260 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF283Q8N7M2 679 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 RBMXL3Q8N7X1 1067 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 OR8B12Q8NGG6 310 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 SLC7A6Q92536 515 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 KCNJ15Q99712 375 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 MOB1AQ9H8S9 216 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 PLSCR2Q9NRY7 297 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 C14orf119Q9NWQ9 140 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 PLEK2Q9NYT0 353 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 MALT1Q9UDY8 824 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF175Q9Y473 711 aa16.48■□□□□ 0.23
CHRNA4-203ENST00000467563 CD2P06729 351 aa16.47■□□□□ 0.23
CHRNA4-203ENST00000467563 ZNF12P17014 697 aa16.47■□□□□ 0.23
CHRNA4-203ENST00000467563 FOXG1P55316 489 aaPredicted RBP16.47■□□□□ 0.23
CHRNA4-203ENST00000467563 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
CHRNA4-203ENST00000467563 NAA40Q86UY6 237 aa16.47■□□□□ 0.23
CHRNA4-203ENST00000467563 FGFBP3Q8TAT2 258 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms