RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FPR3P25089 353 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ALDH3A1P30838 453 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 PRKAR1BP31321 381 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 GATA4P43694 442 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 RGS6P49758 472 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 DAP3P51398 398 aaKnown RBP8.33□□□□□ -1.08
HDAC3-203ENST00000467533 MVDP53602 400 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 CDH12P55289 794 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ZNF74Q16587 644 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 CLEC12AQ5QGZ9 265 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 FAM27BQ5VT28 67 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 PRAMEF6Q5VXH4 476 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 COMTD1Q86VU5 262 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 C8orf46Q8TAG6 207 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 Q8TCH9 128 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ZNF583Q96ND8 569 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 OR52E6Q96RD3 313 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 SEPHS2Q99611 448 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ECSITQ9BQ95 431 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 SLCO1B3Q9NPD5 702 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 TRIM36Q9NQ86 728 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 ANGPT4Q9Y264 503 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
HDAC3-203ENST00000467533 TRAV38-1A0A0B4J264 116 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 WDR91A4D1P6 747 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 GMNCA6NCL1 334 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 RBMY1BA6NDE4 496 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 RBMY1EA6NEQ0 496 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 C5orf58C9J3I9 102 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 BLOC1S5-TXNDC5H3BN57 136 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 RFXANKO14593 260 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 HDAC3O15379 428 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 NDUFA2O43678 99 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 FMO6PO60774 539 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 FCN3O75636 299 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 ANP32DO95626 131 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 HLA-DPB1P04440 258 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 CCDC159P0C7I6 412 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 COX5BP10606 129 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 NR2C1P13056 603 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 SERPINB5P36952 375 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 BMXP51813 675 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 ACSM1Q08AH1 577 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 LRRC74AQ0VAA2 488 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 CRIP3Q6Q6R5 217 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 ADAMTSL5Q6ZMM2 481 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 SLC30A8Q8IWU4 369 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 C4orf33Q8N1A6 199 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 FGFRL1Q8N441 504 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 WIPF2Q8TF74 440 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 AENQ8WTP8 325 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 ERGIC1Q969X5 290 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 SLC17A7Q9P2U7 560 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 STX18Q9P2W9 335 aaKnown RBP8.32□□□□□ -1.08
HDAC3-203ENST00000467533 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
HDAC3-203ENST00000467533 OOEPA6NGQ2 149 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 C12orf71A8MTZ7 269 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 RIPK2O43353 540 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 ECHS1P30084 290 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 UBE2E1P51965 193 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 DGCR2P98153 550 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 MAB21L1Q13394 359 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 ENDOGQ14249 297 aaKnown RBP8.31□□□□□ -1.08
HDAC3-203ENST00000467533 MPPED2Q15777 294 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 C11orf91Q3C1V1 193 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 DHRS4L2Q6PKH6 230 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 FBXW12Q6X9E4 464 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 CCDC121Q6ZUS5 278 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 C10orf111Q8N326 155 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 C17orf50Q8WW18 174 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 HDAC2Q92769 488 aaKnown RBP8.31□□□□□ -1.08
HDAC3-203ENST00000467533 MAL2Q969L2 176 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 MAELQ96JY0 434 aaKnown RBP8.31□□□□□ -1.08
HDAC3-203ENST00000467533 ZIM3Q96PE6 472 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 CPPED1Q9BRF8 314 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-203ENST00000467533 TPT1P8Q9HAU6 139 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 BCL2L10Q9HD36 194 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 C20orf141Q9NUB4 165 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 SLC13A4Q9UKG4 626 aa8.31□□□□□ -1.08
HDAC3-203ENST00000467533 IQCF6A8MYZ5 107 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 SGCEO43556 437 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 CHP2O43745 196 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 TPST1O60507 370 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 NUDT7P0C024 238 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 KRT4P19013 534 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 MSR1P21757 451 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 PAX6P26367 422 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 CD200P41217 278 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms