RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 IRF2P14316 349 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 RAC2P15153 192 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 ZNF26P17031 533 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-206ENST00000466591 KITLGP21583 273 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 OMPP47874 163 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 LIMS1P48059 325 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 SRP9P49458 86 aaKnown RBP14.81□□□□□ -0.04
COL7A1-206ENST00000466591 SLC36A3Q495N2 470 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 MUC20Q8N307 709 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-206ENST00000466591 OR13G1Q8NGZ3 307 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 C22orf15Q8WYQ4 148 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 HAVCR1Q96D42 359 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 PYURFQ96I23 114 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 NSMCE2Q96MF7 247 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 GPX7Q96SL4 187 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-206ENST00000466591 PITX2Q99697 317 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 DDX28Q9NUL7 540 aaKnown RBP14.81□□□□□ -0.04
COL7A1-206ENST00000466591 KLHL21Q9UJP4 597 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 PTP4A3O75365 173 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 FABP3P05413 133 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 DBHP09172 617 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 MDH2P40926 338 aaKnown RBP14.8□□□□□ -0.04
COL7A1-206ENST00000466591 RAD23AP54725 363 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 HILS1P60008 231 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 MALLQ13021 153 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 HLXQ14774 488 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-206ENST00000466591 SEC23BQ15437 767 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 MEP1BQ16820 701 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 OR2T2Q6IF00 324 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 PTCHD4Q6ZW05 846 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 USP43Q70EL4 1123 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 BHLHE23Q8NDY6 225 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 SEMA6DQ8NFY4 1073 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 OR10AD1Q8NGE0 317 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 OR52L1Q8NGH7 329 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 OR4K13Q8NH42 304 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 COQ7Q99807 217 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 OR52D1Q9H346 318 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 RPRD1BQ9NQG5 326 aaKnown RBP14.8□□□□□ -0.04
COL7A1-206ENST00000466591 ATPIF1Q9UII2 106 aa14.8□□□□□ -0.04
COL7A1-206ENST00000466591 F5H5K5 113 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 IFNL4K9M1U5 179 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 GPANK1O95872 356 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 AVPP01185 164 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 IGHV2-70P01814 119 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 ZNF823P16415 610 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 SELEP16581 610 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 CDKN2AP42771 156 aaKnown RBP14.79□□□□□ -0.04
COL7A1-206ENST00000466591 RFX4Q33E94 735 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 TMEM155Q4W5P6 130 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 CCDC92Q53HC0 331 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-206ENST00000466591 SPRNQ5BIV9 151 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
COL7A1-206ENST00000466591 CORO6Q6QEF8 472 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 FAM86B1Q8N7N1 296 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 FAM216AQ8WUB2 273 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 TSSK2Q96PF2 358 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 NMNAT3Q96T66 252 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 GORASP2Q9H8Y8 452 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 NTN4Q9HB63 628 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 DCAF16Q9NXF7 216 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 NDE1Q9NXR1 346 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 AUP1Q9Y679 476 aa14.79□□□□□ -0.04
COL7A1-206ENST00000466591 IMPA2O14732 288 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 RPS2P15880 293 aaKnown RBP14.78□□□□□ -0.04
COL7A1-206ENST00000466591 RRM2P31350 389 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 C16orf89Q6UX73 402 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 BTNL3Q6UXE8 466 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 C1orf229Q6ZS94 237 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-206ENST00000466591 LINC00346Q8IVM7 164 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 C1orf87Q8N0U7 546 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 ZNF283Q8N7M2 679 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 OR8G5Q8NG78 346 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 POP5Q969H6 163 aaKnown RBP14.78□□□□□ -0.04
COL7A1-206ENST00000466591 C7orf34Q96L11 122 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 WDR76Q9H967 626 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 PATZ1Q9HBE1 687 aaKnown RBP14.78□□□□□ -0.04
COL7A1-206ENST00000466591 TMEM100Q9NV29 134 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 B9D1Q9UPM9 204 aa14.78□□□□□ -0.04
COL7A1-206ENST00000466591 IGHV3-64DA0A0J9YX35 117 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 TXNDC12O95881 172 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 LCATP04180 440 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 FPR3P25089 353 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 SLC6A9P48067 706 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 ERFP50548 548 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 MMP16P51512 607 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 ECH1Q13011 328 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 KCNMB1Q16558 191 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 Q6ZR03 302 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 NLRC3Q7RTR2 1065 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 TSEN54Q7Z6J9 526 aaKnown RBP14.77□□□□□ -0.05
COL7A1-206ENST00000466591 LRRC28Q86X40 367 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-206ENST00000466591 PGAM4Q8N0Y7 254 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 SDR9C7Q8NEX9 313 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 OR11L1Q8NGX0 322 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 GNPDA2Q8TDQ7 276 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 SPRYD4Q8WW59 207 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-206ENST00000466591 PLEKHA8Q96JA3 519 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 CDRT15Q96T59 188 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 ATF6BQ99941 703 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms