RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 HSD17B8Q92506 261 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 BCL2L2Q92843 193 aaPredicted RBP10.62□□□□□ -0.71
VPS16-206ENST00000466415 C12orf43Q96C57 262 aaKnown RBP10.62□□□□□ -0.71
VPS16-206ENST00000466415 C4orf45Q96LM5 186 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 KCNJ15Q99712 375 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 COQ7Q99807 217 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 PNRC2Q9NPJ4 139 aaKnown RBP10.62□□□□□ -0.71
VPS16-206ENST00000466415 DDX28Q9NUL7 540 aaKnown RBP10.62□□□□□ -0.71
VPS16-206ENST00000466415 OR52A1Q9UKL2 312 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 MEMO1Q9Y316 297 aa10.62□□□□□ -0.71
VPS16-206ENST00000466415 SIRT4Q9Y6E7 314 aaPredicted RBP10.62□□□□□ -0.71
VPS16-206ENST00000466415 IQCMA0A1B0GVH7 501 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 TMEM212A6NML5 194 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 F5H5K5 113 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 H3BMQ9 156 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 M0R135 149 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 MSTNO14793 375 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 SLC22A1O15245 554 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 CD1AP06126 327 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 MMP7P09237 267 aaPredicted RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 CCR9P51686 369 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 TPTEP56180 551 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 TUBA1BP68363 451 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 PSG4Q00888 419 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 GSG1Q2KHT4 349 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 PABPC1L2AQ5JQF8 200 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 FDX2Q6P4F2 183 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 SLC16A12Q6ZSM3 486 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 NCCRP1Q6ZVX7 275 aaPredicted RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 TUBA1AQ71U36 451 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 BHLHA15Q7RTS1 189 aaPredicted RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 CATSPERDQ86XM0 798 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 GABRG1Q8N1C3 465 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 C17orf78Q8N4C9 275 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 MS4A15Q8N5U1 240 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 KBTBD8Q8NFY9 601 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 GHSRQ92847 366 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 RPL3LQ92901 407 aaKnown RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 ZNF799Q96GE5 643 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 PGLYRP3Q96LB9 341 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 DOK1Q99704 481 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 PDCD1LG2Q9BQ51 273 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 WNT5BQ9H1J7 359 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 ZNF629Q9UEG4 869 aaPredicted RBP10.61□□□□□ -0.71
VPS16-206ENST00000466415 GSTK1Q9Y2Q3 226 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 ZNF281Q9Y2X9 895 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 CACNA1GO43497 2377 aa10.61□□□□□ -0.71
VPS16-206ENST00000466415 ARHGAP21Q5T5U3 1957 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 TRDV1A0A1B0GX56 115 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 CCL21O00585 134 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 GABRPO00591 440 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 LRRTM2O43300 516 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 SYNGR3O43761 229 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 GPX5O75715 221 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 UBCP0CG48 685 aaKnown RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 ZNF121P58317 390 aaPredicted RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 VBP1P61758 197 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 RAB1AP62820 205 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 MRPL49Q13405 166 aaKnown RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 TSC22D1Q15714 1073 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 GABRA6Q16445 453 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 ODF4Q2M2E3 257 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 YIF1BQ5BJH7 314 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 ZNF704Q6ZNC4 412 aaPredicted RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 MRGPRGQ86SM5 289 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 COMMD2Q86X83 199 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 PRSS35Q8N3Z0 413 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 FGFBP3Q8TAT2 258 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 RPS4Y2Q8TD47 263 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 TSEN15Q8WW01 171 aaKnown RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 DMRTA2Q96SC8 542 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 HDHD5Q9BXW7 423 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 PBOV1Q9GZY1 135 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 SP140LQ9H930 580 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 FAM206AQ9NX38 181 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 FRRS1LQ9P0K9 344 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 ATPIF1Q9UII2 106 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 SF3B6Q9Y3B4 125 aaKnown RBP10.6□□□□□ -0.71
VPS16-206ENST00000466415 DOCK7Q96N67 2140 aa10.6□□□□□ -0.71
VPS16-206ENST00000466415 ARPC4-TTLL3A0A0A6YYG9 625 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 TBX1O43435 398 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 SRSF10O75494 262 aaKnown RBP10.59□□□□□ -0.71
VPS16-206ENST00000466415 ZFPL1O95159 310 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 PNPP00491 289 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 COX5BP10606 129 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 SLC2A1P11166 492 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 GALP22466 123 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 MAPK3P27361 379 aaPredicted RBP10.59□□□□□ -0.71
VPS16-206ENST00000466415 APLNRP35414 380 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 CRYBB2P43320 205 aa10.59□□□□□ -0.71
VPS16-206ENST00000466415 KIR3DL2P43630 455 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms