RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
VCP-204ENST00000466100 RGS10O43665 173 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 CLDN1O95832 211 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 CECR9P0C854 216 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 EPXP11678 715 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 APEX1P27695 318 aaKnown RBP9.67□□□□□ -0.86
VCP-204ENST00000466100 IDH3GP51553 393 aaPredicted RBP9.67□□□□□ -0.86
VCP-204ENST00000466100 CDH15P55291 814 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 HGFACQ04756 655 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 EGR3Q06889 387 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 DEGS2Q6QHC5 323 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 PRSS48Q7RTY5 328 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 LHFPL3Q86UP9 236 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 DMRTC2Q8IXT2 367 aaPredicted RBP9.67□□□□□ -0.86
VCP-204ENST00000466100 ZNF679Q8IYX0 411 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 SLC7A6Q92536 515 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 MUCL1Q96DR8 90 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 POM121L2Q96KW2 1035 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 MED18Q9BUE0 208 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 ALG8Q9BVK2 526 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 FBXL3Q9UKT7 428 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 LRP12Q9Y561 859 aa9.67□□□□□ -0.86
VCP-204ENST00000466100 APCP25054 2843 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 TUBAL3A6NHL2 446 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 TRIM64CA6NLI5 447 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 PSMD9O00233 223 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 SIAH2O43255 324 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ICMTO60725 284 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 MRPS14O60783 128 aaKnown RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 ZNF254O75437 659 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 SRSF10O75494 262 aaKnown RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 SULT1C4O75897 302 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 DBHP09172 617 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ANOS1P23352 680 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 LOXP28300 417 aaPredicted RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 PEX19P40855 299 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 HTR5AP47898 357 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ZNF83P51522 516 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ACTA2P62736 377 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ACTG2P63267 376 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ECH1Q13011 328 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 OR2G6Q5TZ20 316 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 KCTD18Q6PI47 426 aaPredicted RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 ZNF773Q6PK81 442 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 SPATC1Q76KD6 591 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 WFDC8Q8IUA0 241 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 EGFL6Q8IUX8 553 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ALDH16A1Q8IZ83 802 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 PAQR4Q8N4S7 273 aaPredicted RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 OR52N1Q8NH53 320 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ZC3HAV1LQ96H79 300 aaKnown RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 C1QTNF6Q9BXI9 259 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ISG20L2Q9H9L3 353 aaKnown RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 LSM2Q9Y333 95 aaKnown RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 RAI1Q7Z5J4 1906 aaPredicted RBP9.66□□□□□ -0.86
VCP-204ENST00000466100 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
VCP-204ENST00000466100 ABCA12Q86UK0 2595 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 IGHV2OR16-5A0A0B4J2B6 119 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 IQCMA0A1B0GVH7 501 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 DPRXA6NFQ7 191 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 METTL15A6NJ78 407 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PTHP01270 115 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 H2BFMP0C1H6 154 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 ACSM4P0C7M7 580 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 SMIM18P0DKX4 95 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 ZNF35P13682 527 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 MYL12AP19105 171 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PCMT1P22061 227 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 STOMP27105 288 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 CALCRP30988 508 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 DCTDP32321 178 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 OR12D2P58182 307 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PSMA6P60900 246 aaKnown RBP9.65□□□□□ -0.86
VCP-204ENST00000466100 GRB2P62993 217 aaKnown RBP9.65□□□□□ -0.86
VCP-204ENST00000466100 NAAAQ02083 359 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PLP2Q04941 152 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 TBCEQ15813 527 aaPredicted RBP9.65□□□□□ -0.86
VCP-204ENST00000466100 TP53I3Q53FA7 332 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 LIPNQ5VXI9 398 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PLEKHG7Q6ZR37 379 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PRSS45Q7RTY3 260 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 KRT77Q7Z794 578 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 SPARTQ8N0X7 666 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 NANOGP1Q8N7R0 232 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 SLC30A7Q8NEW0 376 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 PELI1Q96FA3 418 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 C4orf36Q96KX1 117 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 KCNJ15Q99712 375 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 ELOVL3Q9HB03 270 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 CENPMQ9NSP4 180 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 ACOXLQ9NUZ1 547 aa9.65□□□□□ -0.86
VCP-204ENST00000466100 IKZF2Q9UKS7 526 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms