RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 OMPP47874 163 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC9A3P48764 834 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ERFP50548 548 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF133P52736 654 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PRPS1P60891 318 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ERVS71-1P61550 626 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ERVK-25P63136 954 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NAAAQ02083 359 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TGFBR3Q03167 851 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NPRL3Q12980 569 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TNK1Q13470 666 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 DGCR6Q14129 220 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TRAM2Q15035 370 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ADIPOQQ15848 244 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZBED5Q49AG3 693 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 MESTQ5EB52 335 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM255AQ5JRV8 349 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 FGD3Q5JSP0 725 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SAMD4BQ5PRF9 694 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 KRT80Q6KB66 452 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC25A47Q6Q0C1 308 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 KLHL17Q6TDP4 642 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF730Q6ZMV8 503 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF813Q6ZN06 617 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 DNM1P46Q6ZS02 220 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PTCHD4Q6ZW05 846 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 Q6ZWC4 215 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TMPRSS11FQ6ZWK6 438 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 FAM122BQ7Z309 247 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZER1Q7Z7L7 766 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM179BQ7Z7N9 219 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 LRP11Q86VZ4 500 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 LRRC75A-AS1Q8N1F1 130 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 LRRC18Q8N456 261 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NOXO1Q8NFA2 376 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 OR4K5Q8NGD3 323 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 OR6N1Q8NGY5 312 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM171Q8WVE6 324 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ACOT11Q8WXI4 607 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 LZICQ8WZA0 190 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PIGTQ969N2 578 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF566Q969W8 418 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 RASD2Q96D21 266 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 FBXO17Q96EF6 278 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC25A44Q96H78 314 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PYURFQ96I23 114 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NSL1Q96IY1 281 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 RITA1Q96K30 269 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 Q96M85 177 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PIP5K1AQ99755 562 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 DHRS9Q9BPW9 319 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 BTBD10Q9BSF8 475 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 CACNG6Q9BXT2 260 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TXNIPQ9H3M7 391 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NGBQ9NPG2 151 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 INIPQ9NRY2 104 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM38BQ9NVV0 291 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 MYEF2Q9P2K5 600 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 RPS6KA6Q9UK32 745 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SIGLEC7Q9Y286 467 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 AP3M1Q9Y2T2 418 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 JMJD1CQ15652 2540 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 LOC100509620A0A075B734 347 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 A0A1W2PRG6 482 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 OR6C65A6NJZ3 312 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ACOT8O14734 319 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 LY6G6DO95868 133 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 MMP7P09237 267 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 OR4A8P0C604 315 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SAGP10523 405 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 PSKH1P11801 424 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF35P13682 527 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 RHCEP18577 417 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ANOS1P23352 680 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 RRM2P31350 389 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 THBS4P35443 961 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 WNT5AP41221 380 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 MAGEA2P43356 314 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 PTDSS1P48651 473 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 FABP6P51161 128 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SH3BGRP55822 239 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ATP5J2P56134 94 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 UBE2NP61088 152 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 RPL27P61353 136 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 RAB1AP62820 205 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SPIBQ01892 262 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ENDOGQ14249 297 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 GSG1Q2KHT4 349 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 KHDC1LQ5JSQ8 128 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 C10orf128Q5T292 105 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SHEQ5VZ18 495 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 LCN8Q6JVE9 175 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 UGT2A3Q6UWM9 527 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 C16orf89Q6UX73 402 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms