RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 DPY19L4Q7Z388 723 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 BCDIN3DQ7Z5W3 292 aaKnown RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 OR1J1Q8NGS3 322 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 ABHD4Q8TB40 342 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 FAM81AQ8TBF8 368 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 ST7LQ8TDW4 575 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 IPCEF1Q8WWN9 437 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 TEAD3Q99594 435 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 CACNG6Q9BXT2 260 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 MRPL37Q9BZE1 423 aaKnown RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 DDX28Q9NUL7 540 aaKnown RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 TBCCD1Q9NVR7 557 aa17.46■□□□□ 0.39
PTCD3-206ENST00000465560 H2AFY2Q9P0M6 372 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 CHD3Q12873 2000 aaKnown RBP17.46■□□□□ 0.39
PTCD3-206ENST00000465560 TMEM129A0AVI4 362 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 CASQ2O14958 399 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 SELENOFO60613 162 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 NGFP01138 241 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 EVX1P49640 407 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 LRRC36Q1X8D7 754 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 RSPO1Q2MKA7 263 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 MEPCEQ7L2J0 689 aaKnown RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 GID4Q8IVV7 300 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 TRUB1Q8WWH5 349 aaKnown RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 PERPQ96FX8 193 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 IMPAD1Q9NX62 359 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 SMPD3Q9NY59 655 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 FBXO9Q9UK97 447 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-206ENST00000465560 GRIP1Q9Y3R0 1128 aa17.45■□□□□ 0.38
PTCD3-206ENST00000465560 SLC22A31A6NKX4 558 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 H7C417 338 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 J3QW42 95 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF250P15622 560 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 NAA10P41227 235 aaPredicted RBP17.44■□□□□ 0.38
PTCD3-206ENST00000465560 RGS6P49758 472 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 PPP1CBP62140 327 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 EIF2B1Q14232 305 aaKnown RBP17.44■□□□□ 0.38
PTCD3-206ENST00000465560 GGTLC2Q14390 218 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 TESK1Q15569 626 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 OGFRL1Q5TC84 451 aaPredicted RBP17.44■□□□□ 0.38
PTCD3-206ENST00000465560 GALNT4Q8N4A0 578 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 SLAMF6Q96DU3 332 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 TRMT61AQ96FX7 289 aaKnown RBP17.44■□□□□ 0.38
PTCD3-206ENST00000465560 DOK1Q99704 481 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 SYT3Q9BQG1 590 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 FZR1Q9UM11 496 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 GMPPBQ9Y5P6 360 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 PMF1-BGLAPU3KQ54 211 aa17.44■□□□□ 0.38
PTCD3-206ENST00000465560 IGLV3-9A0A075B6K5 115 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF878C9JN71 531 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 H3BSA7 217 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 DLGAP1O14490 977 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 SLC16A9Q7RTY1 509 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 LRP11Q86VZ4 500 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF454Q8N9F8 522 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 OTOSQ8NHW6 89 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 SYNPRQ8TBG9 265 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 SLC25A40Q8TBP6 338 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 SPTSSAQ969W0 71 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 MARS2Q96GW9 593 aaKnown RBP17.43■□□□□ 0.38
PTCD3-206ENST00000465560 ABHD6Q9BV23 337 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 FAM118AQ9NWS6 357 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 HAO2Q9NYQ3 351 aa17.43■□□□□ 0.38
PTCD3-206ENST00000465560 NKX1-2Q9UD57 310 aaPredicted RBP17.43■□□□□ 0.38
PTCD3-206ENST00000465560 LOC100130705A0A1B0GUX0 176 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 F5H5K5 113 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 H0YHG0 523 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 SLC16A6O15403 523 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 ACSM4P0C7M7 580 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 TUBG1P23258 451 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 OTX1P32242 354 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 PPOXP50336 477 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 ATP5J2P56134 94 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 KLF3P57682 345 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 SLC34A1Q06495 639 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF718Q3SXZ3 478 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 SPATA46Q5T0L3 261 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 MBNL2Q5VZF2 373 aaKnown RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 RHOUQ7L0Q8 258 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 RNF133Q8WVZ7 376 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 APOBEC3DQ96AK3 386 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 COG8Q96MW5 612 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 CNN2Q99439 309 aaKnown RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 COPS4Q9BT78 406 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 OR2J1Q9GZK6 312 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 YIPF3Q9GZM5 350 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 RNPEPL1Q9HAU8 725 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 CENPMQ9NSP4 180 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 DNAJC27Q9NZQ0 273 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 MYEF2Q9P2K5 600 aaKnown RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 WARS2Q9UGM6 360 aaKnown RBP17.42■□□□□ 0.38
PTCD3-206ENST00000465560 DUSP13Q9UII6 198 aa17.42■□□□□ 0.38
PTCD3-206ENST00000465560 M0R135 149 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 CLPTM1O96005 669 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 LYNP07948 512 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 MRPL3P09001 348 aaKnown RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 HTR1FP30939 366 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 NUDT6P53370 316 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms