RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ABHD16AO95870 558 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 LCKP06239 509 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 SPARCP09486 303 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ANPEPP15144 967 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 OTX1P32242 354 aaPredicted RBP17.44■□□□□ 0.38
SKA3-205ENST00000465471 RCN1Q15293 331 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 KLHL12Q53G59 568 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 Q5PR19 223 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ARL9Q6T311 187 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 UNQ6126/PRO20091Q6UXV3 157 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ZBTB49Q6ZSB9 765 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 DCXRQ7Z4W1 244 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ERI1Q8IV48 349 aaKnown RBP17.44■□□□□ 0.38
SKA3-205ENST00000465471 TCEANCQ8N8B7 351 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ABHD4Q8TB40 342 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 EME1Q96AY2 570 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 HRASLS5Q96KN8 279 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 PITX2Q99697 317 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 ORC6Q9Y5N6 252 aa17.44■□□□□ 0.38
SKA3-205ENST00000465471 TLX2O43763 284 aaPredicted RBP17.43■□□□□ 0.38
SKA3-205ENST00000465471 RGS6P49758 472 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 PPP1CBP62140 327 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 APOFQ13790 326 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 TMEM255AQ5JRV8 349 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 NXNL2Q5VZ03 156 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 MBNL2Q5VZF2 373 aaKnown RBP17.43■□□□□ 0.38
SKA3-205ENST00000465471 TMEM154Q6P9G4 183 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 COLCA1Q6ZS62 124 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 DPY19L4Q7Z388 723 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 SLC25A40Q8TBP6 338 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 MBOAT4Q96T53 435 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 TEAD3Q99594 435 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 SYT3Q9BQG1 590 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 FZR1Q9UM11 496 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 HIVEP1P15822 2718 aa17.43■□□□□ 0.38
SKA3-205ENST00000465471 SELENOFO60613 162 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 CLPTM1O96005 669 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 ACSM4P0C7M7 580 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 TUBG1P23258 451 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 ELF3P78545 371 aaPredicted RBP17.42■□□□□ 0.38
SKA3-205ENST00000465471 GGTLC2Q14390 218 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 DNM1P46Q6ZS02 220 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 SHFQ7M4L6 423 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 BCDIN3DQ7Z5W3 292 aaKnown RBP17.42■□□□□ 0.38
SKA3-205ENST00000465471 WFDC11Q8NEX6 87 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 OR6N2Q8NGY6 317 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 SYNPRQ8TBG9 265 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 SLAMF6Q96DU3 332 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 SORCS2Q96PQ0 1159 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 OR2J1Q9GZK6 312 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 TOR3AQ9H497 397 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 BARX1Q9HBU1 254 aaPredicted RBP17.42■□□□□ 0.38
SKA3-205ENST00000465471 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 GRIP1Q9Y3R0 1128 aa17.42■□□□□ 0.38
SKA3-205ENST00000465471 IGHV3-13P01766 116 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 MPV17P39210 176 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 KLF3P57682 345 aaPredicted RBP17.41■□□□□ 0.38
SKA3-205ENST00000465471 RPS7P62081 194 aaKnown RBP17.41■□□□□ 0.38
SKA3-205ENST00000465471 ZNF718Q3SXZ3 478 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 ZIK1Q3SY52 487 aaPredicted RBP17.41■□□□□ 0.38
SKA3-205ENST00000465471 SPATA46Q5T0L3 261 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 LCN1P1Q5VSP4 162 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 RHOUQ7L0Q8 258 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 OR8J1Q8NGP2 316 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 OTOSQ8NHW6 89 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 KLF14Q8TD94 323 aaPredicted RBP17.41■□□□□ 0.38
SKA3-205ENST00000465471 RNF133Q8WVZ7 376 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 IL4I1Q96RQ9 567 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 ABHD6Q9BV23 337 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 C1QTNF5Q9BXJ0 243 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 POFUT1Q9H488 388 aa17.41■□□□□ 0.38
SKA3-205ENST00000465471 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 M0R233 179 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 DLGAP1O14490 977 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 CDC42P60953 191 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 EIF2B1Q14232 305 aaKnown RBP17.4■□□□□ 0.38
SKA3-205ENST00000465471 MEPCEQ7L2J0 689 aaKnown RBP17.4■□□□□ 0.38
SKA3-205ENST00000465471 TGIF2LYQ8IUE0 185 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 GID4Q8IVV7 300 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 ZNF454Q8N9F8 522 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 APOBEC3DQ96AK3 386 aaPredicted RBP17.4■□□□□ 0.38
SKA3-205ENST00000465471 COG8Q96MW5 612 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 AMELYQ99218 206 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 HAO2Q9NYQ3 351 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 DUSP13Q9UII6 198 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 STARD10Q9Y365 291 aa17.4■□□□□ 0.38
SKA3-205ENST00000465471 FLNAP21333 2647 aaKnown RBP17.4■□□□□ 0.38
SKA3-205ENST00000465471 CHD3Q12873 2000 aaKnown RBP17.4■□□□□ 0.38
SKA3-205ENST00000465471 SLC22A31A6NKX4 558 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 M0R135 149 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 CASQ2O14958 399 aaPredicted RBP17.39■□□□□ 0.37
SKA3-205ENST00000465471 NAA10P41227 235 aaPredicted RBP17.39■□□□□ 0.37
SKA3-205ENST00000465471 ALDH3B1P43353 468 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 EFNA4P52798 201 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 MAD2L1BPQ15013 274 aaPredicted RBP17.39■□□□□ 0.37
SKA3-205ENST00000465471 TRIP10Q15642 601 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 SLC16A9Q7RTY1 509 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 FAM81AQ8TBF8 368 aa17.39■□□□□ 0.37
SKA3-205ENST00000465471 TRUB1Q8WWH5 349 aaKnown RBP17.39■□□□□ 0.37
SKA3-205ENST00000465471 SPTSSAQ969W0 71 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms