RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 C5orf49A4QMS7 147 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 RER1O15258 196 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 PRODHO43272 600 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 PRKYO43930 277 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 SNAP29O95721 258 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 FAM157CP0CG43 387 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 COX5BP10606 129 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 USF1P22415 310 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 GSTT1P30711 240 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 HTR5AP47898 357 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 RPS7P62081 194 aaKnown RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 SNRPD2P62316 118 aaKnown RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 MST1LQ2TV78 715 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 CORO6Q6QEF8 472 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 ZNF771Q7L3S4 317 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 VASH1Q7L8A9 365 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 LINC00346Q8IVM7 164 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 TCEANCQ8N8B7 351 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 POM121L2Q96KW2 1035 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 DCLRE1BQ9H816 532 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 H2AFY2Q9P0M6 372 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 EIF3KQ9UBQ5 218 aaKnown RBP15.24■□□□□ 0.03
COL7A1-205ENST00000465238 CYB5R1Q9UHQ9 305 aa15.24■□□□□ 0.03
COL7A1-205ENST00000465238 LOC100509620A0A075B734 347 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 RNF212BA8MTL3 300 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 H0YHG0 523 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 NDUFS8O00217 210 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 ZNF593O00488 134 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-205ENST00000465238 SPARCP09486 303 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 THBS4P35443 961 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 GGT2P36268 569 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 SERPINF1P36955 418 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 RAD52P43351 418 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 ENTPD1P49961 510 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 CDC42P60953 191 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 HIST1H3AP68431 136 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 CCDC92Q53HC0 331 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-205ENST00000465238 SLC35D3Q5M8T2 416 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 HIST2H3PS2Q5TEC6 136 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 LINC01590Q5TEZ4 76 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 CYB5R2Q6BCY4 276 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 SLC18B1Q6NT16 456 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 LYPD4Q6UWN0 246 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 UNQ6126/PRO20091Q6UXV3 157 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 HIST2H3AQ71DI3 136 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-205ENST00000465238 OR1F12Q8NHA8 337 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 TMEM163Q8TC26 289 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 ZNF442Q9H7R0 627 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 WDR76Q9H967 626 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 COMMD3-BMI1R4GMX3 469 aa15.23■□□□□ 0.03
COL7A1-205ENST00000465238 MALRD1Q5VYJ5 2156 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 B9A039 149 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 M0R129 80 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 LY6HO94772 140 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 FAM157BP0CG42 384 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 GLRXP35754 106 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 PDLIM4P50479 330 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 UCP2P55851 309 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 RPS23P62266 143 aaKnown RBP15.22■□□□□ 0.03
COL7A1-205ENST00000465238 APOFQ13790 326 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 LRRC36Q1X8D7 754 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 TEX30Q5JUR7 227 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 ELFN2Q5R3F8 820 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 LPCAT4Q643R3 524 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 TMEM154Q6P9G4 183 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 ARL9Q6T311 187 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 ERI1Q8IV48 349 aaKnown RBP15.22■□□□□ 0.03
COL7A1-205ENST00000465238 GALNT4Q8N4A0 578 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 BBS1Q8NFJ9 593 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 OR6N2Q8NGY6 317 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 ZMYND19Q96E35 227 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-205ENST00000465238 SORCS2Q96PQ0 1159 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 IL4I1Q96RQ9 567 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 INTS14Q96SY0 518 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 PITX2Q99697 317 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 REPIN1Q9BWE0 567 aaKnown RBP15.22■□□□□ 0.03
COL7A1-205ENST00000465238 BCL2L14Q9BZR8 327 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 HDHD2Q9H0R4 259 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 OR51B6Q9H340 312 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 TOR3AQ9H497 397 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 MYOZ1Q9NP98 299 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-205ENST00000465238 LPAR3Q9UBY5 353 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 CMAHPQ9Y471 501 aa15.22■□□□□ 0.03
COL7A1-205ENST00000465238 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 VWC2LB2RUY7 222 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 SYNGR3O43761 229 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 OR4A8P0C604 315 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 IGHV4-31P0DP07 118 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 RPS27P42677 84 aaKnown RBP15.21■□□□□ 0.03
COL7A1-205ENST00000465238 GZMKP49863 264 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 EFNB1P98172 346 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 ECH1Q13011 328 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 LCN1P1Q5VSP4 162 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 TMEM158Q8WZ71 300 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 HRASLS5Q96KN8 279 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 MBOAT4Q96T53 435 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 COQ7Q99807 217 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 PIMREGQ9BSJ6 248 aa15.21■□□□□ 0.03
COL7A1-205ENST00000465238 BEX2Q9BXY8 128 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms