RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 ZCCHC24Q8N2G6 241 aaKnown RBP13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TCEANCQ8N8B7 351 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ABHD4Q8TB40 342 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC25A40Q8TBP6 338 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 STMN2Q93045 179 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 INTS14Q96SY0 518 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TEAD3Q99594 435 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 C9orf16Q9BUW7 83 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR2J1Q9GZK6 312 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 STARD10Q9Y365 291 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GRIP1Q9Y3R0 1128 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MED13LQ71F56 2210 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 M0R129 80 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TLX2O43763 284 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 F12P00748 615 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SPARCP09486 303 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MPV17P39210 176 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 EFNA4P52798 201 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZNF718Q3SXZ3 478 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KLHL12Q53G59 568 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TMEM255AQ5JRV8 349 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SPATA46Q5T0L3 261 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 AADACL4Q5VUY2 407 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MBNL2Q5VZF2 373 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TMEM163Q8TC26 289 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 Q96MF0 132 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SORCS2Q96PQ0 1159 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ATF6BQ99941 703 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TMUB1Q9BVT8 246 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 POFUT1Q9H488 388 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RIBC2Q9H4K1 309 aa13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 BARX1Q9HBU1 254 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 H3BSA7 217 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SSX4O60224 188 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ADRA2AP08913 450 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TUBG1P23258 451 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ALDH3B1P43353 468 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KLF3P57682 345 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SELENOVP59797 346 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 APOFQ13790 326 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZIK1Q3SY52 487 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZBTB49Q6ZSB9 765 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DPY19L4Q7Z388 723 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 BCDIN3DQ7Z5W3 292 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SLAMF6Q96DU3 332 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 IL4I1Q96RQ9 567 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 C1QTNF5Q9BXJ0 243 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TUBG2Q9NRH3 451 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TAAR3PQ9P1P4 343 aa13.19□□□□□ -0.3
RAB11FIP3-208ENST00000464263 HIVEP1P15822 2718 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 F5H5K5 113 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 M0R233 179 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SELENOFO60613 162 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ANPEPP15144 967 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RGS6P49758 472 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RAD23AP54725 363 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MEPCEQ7L2J0 689 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 HRASLS5Q96KN8 279 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MBOAT4Q96T53 435 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ABHD6Q9BV23 337 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DYNLRB1Q9NP97 96 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ORC6Q9Y5N6 252 aa13.18□□□□□ -0.3
RAB11FIP3-208ENST00000464263 A0A1W2PPW3 197 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 J3QW42 95 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 LY6HO94772 140 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 GCH1P30793 250 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NUDT6P53370 316 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RPS7P62081 194 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 PSG7Q13046 419 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TNK1Q13470 666 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MOGQ16653 247 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 LURAP1LQ8IV03 231 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 OTOSQ8NHW6 89 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RNF133Q8WVZ7 376 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 UBE2FQ969M7 185 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms