RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 RAB40AQ8WXH6 277 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 ACOT11Q8WXI4 607 aaPredicted RBP12.82□□□□□ -0.36
CMSS1-202ENST00000463526 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 TMIGD2Q96BF3 282 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 COG8Q96MW5 612 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 WACQ9BTA9 647 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 SYT4Q9H2B2 425 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 WDR76Q9H967 626 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 GID8Q9NWU2 228 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 IL20RAQ9UHF4 553 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 POLR1DQ9Y2S0 133 aa12.82□□□□□ -0.36
CMSS1-202ENST00000463526 IGHV2-70DA0A0C4DH43 119 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 BBIP1A8MTZ0 92 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 F5H5P2 479 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 CLDN34H7C241 214 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 NPPAP01160 153 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 SELEP16581 610 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 SRP9P49458 86 aaKnown RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 PRSS12P56730 875 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 PAX2Q02962 417 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 SRSF4Q08170 494 aaKnown RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 KRR1Q13601 381 aaKnown RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 MIDNQ504T8 468 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 C16orf87Q6PH81 154 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 MBOAT2Q6ZWT7 520 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 FKBP9P1Q75LS8 142 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 POU5F2Q8N7G0 328 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 PCYOX1LQ8NBM8 494 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 OR5L1Q8NGL2 311 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 OR13G1Q8NGZ3 307 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
CMSS1-202ENST00000463526 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 ZNF582Q96NG8 517 aaPredicted RBP12.81□□□□□ -0.36
CMSS1-202ENST00000463526 IFNL4K9M1U5 179 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 SOCS2O14508 198 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 GSTA4O15217 222 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
CMSS1-202ENST00000463526 PMELP40967 661 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 MAPRE2Q15555 327 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 MEP1BQ16820 701 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 DEFB112Q30KQ8 113 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 FAM122BQ7Z309 247 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 C19orf18Q8NEA5 215 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 OR8B3Q8NGG8 313 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 OR10S1Q8NGN2 331 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 FAM46AQ96IP4 442 aaKnown RBP12.8□□□□□ -0.36
CMSS1-202ENST00000463526 PLEKHA8Q96JA3 519 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 OR8B2Q96RD0 313 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 NUDT16L1Q9BRJ7 211 aaKnown RBP12.8□□□□□ -0.36
CMSS1-202ENST00000463526 NDEL1Q9GZM8 345 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 SAR1AQ9NR31 198 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 CMTM6Q9NX76 183 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 IER3IP1Q9Y5U9 82 aa12.8□□□□□ -0.36
CMSS1-202ENST00000463526 LRRC30A6NM36 301 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 MLNRO43193 412 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 AHCYL1O43865 530 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 PLATP00750 562 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 HLA-DPB1P04440 258 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 PITPNBP48739 271 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 RGS6P49758 472 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 LSM6P62312 80 aaKnown RBP12.79□□□□□ -0.36
CMSS1-202ENST00000463526 IFI44LQ53G44 452 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 CORO6Q6QEF8 472 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 FBXW12Q6X9E4 464 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 TMPRSS11FQ6ZWK6 438 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 KIR3DL3Q8N743 410 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-202ENST00000463526 RCN3Q96D15 328 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 NUAK2Q9H093 628 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-202ENST00000463526 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
CMSS1-202ENST00000463526 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 FAM181BA6NEQ2 426 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 CXCR6O00574 342 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 NDUFB2O95178 105 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 KNG1P01042 644 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 PPIAL4GP0DN37 164 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 TROVE2P10155 538 aaKnown RBP eCLIP12.78□□□□□ -0.36
CMSS1-202ENST00000463526 SDHAP31040 664 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 FGF12P61328 243 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 LIPEQ05469 1076 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
CMSS1-202ENST00000463526 ZNF404Q494X3 552 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 TSSK2Q96PF2 358 aa12.78□□□□□ -0.36
CMSS1-202ENST00000463526 SLC30A2Q9BRI3 323 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms