RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 BGLAPP02818 100 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 HLA-DPB1P04440 258 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 HCKP08631 526 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 FPR3P25089 353 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 GSK3BP49841 420 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 LGALS4P56470 323 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 PRAMEF6Q5VXH4 476 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 C10orf111Q8N326 155 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 TEX37Q96LM6 180 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 ZNF347Q96SE7 839 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 CPPED1Q9BRF8 314 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-211ENST00000463372 ARMC7Q9H6L4 198 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 TIMM10BQ9Y5J6 103 aa10.64□□□□□ -0.71
C9orf3-211ENST00000463372 IGKV1D-42A0A075B6H8 117 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 LYPLA1O75608 230 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 NR2F1P10589 423 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 CHI3L1P36222 383 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 CALCOCO2Q13137 446 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 MPPED2Q15777 294 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 PGS1Q32NB8 556 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 CEP85LQ5SZL2 805 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 FAM90A1Q86YD7 464 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 KRTCAP2Q8N6L1 136 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 KLHL30-AS1Q8NEE0 82 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 SLC26A10Q8NG04 563 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 OR5D13Q8NGL4 314 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 H1FXQ92522 213 aaKnown RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 MOGAT1Q96PD6 335 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 MRPL15Q9P015 296 aaKnown RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 MARCOQ9UEW3 520 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-211ENST00000463372 TNCP24821 2201 aa10.63□□□□□ -0.71
C9orf3-211ENST00000463372 H3BUI4 141 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 LINC00032P0C843 101 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 PCBD1P61457 104 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 HOXC5Q00444 222 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 POU4F2Q12837 409 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 HIST3H3Q16695 136 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 ZNF260Q3ZCT1 412 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 FAM27D1Q5T7N8 215 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 RNF220Q5VTB9 566 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 HCP5Q6MZN7 132 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 C1orf94Q6P1W5 598 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 OR2W3Q7Z3T1 314 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 CLIP4Q8N3C7 705 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 OR5J2Q8NH18 312 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 NABP1Q96AH0 204 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 LYZL4Q96KX0 146 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
C9orf3-211ENST00000463372 PRPF19Q9UMS4 504 aaKnown RBP10.62□□□□□ -0.71
C9orf3-211ENST00000463372 ZNF443Q9Y2A4 671 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-211ENST00000463372 A0A1W2PQ09 198 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 H0YAE9 185 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 RNF13O43567 381 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 NDUFB3O43676 98 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 CD200P41217 278 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-211ENST00000463372 RAD23AP54725 363 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 C18orf65Q6ZTR6 163 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 SLC36A1Q7Z2H8 476 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 NOXO1Q8NFA2 376 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 CACYBPQ9HB71 228 aaKnown RBP10.61□□□□□ -0.71
C9orf3-211ENST00000463372 PTTG3PQ9NZH4 202 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 FIS1Q9Y3D6 152 aa10.61□□□□□ -0.71
C9orf3-211ENST00000463372 DMBT1Q9UGM3 2413 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-211ENST00000463372 IGHV3OR15-7A0A075B7D8 119 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 LRRN3E7EW58 273 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 CCL24O00175 119 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 DUX4L4P0CJ87 422 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 NAA20P61599 178 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 SLC7A5Q01650 507 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 LRRC10Q5BKY1 277 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 ALG10BQ5I7T1 473 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 C10orf128Q5T292 105 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 FAM27BQ5VT28 67 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 HHATQ5VTY9 493 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 OR4F3Q6IEY1 312 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 FBXW12Q6X9E4 464 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 ARMC8Q8IUR7 673 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 LRRC34Q8IZ02 419 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 OR5L1Q8NGL2 311 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 FBXO25Q8TCJ0 367 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 DNAJA4Q8WW22 397 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-211ENST00000463372 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 CCL13Q99616 98 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 ZFP57Q9NU63 452 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 TMEM216Q9P0N5 145 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 LYVE1Q9Y5Y7 322 aa10.6□□□□□ -0.71
C9orf3-211ENST00000463372 IQCF6A8MYZ5 107 aa10.59□□□□□ -0.71
C9orf3-211ENST00000463372 DEDDO75618 318 aa10.59□□□□□ -0.71
C9orf3-211ENST00000463372 SLC2A10O95528 541 aa10.59□□□□□ -0.71
C9orf3-211ENST00000463372 CPSF4O95639 269 aaKnown RBP10.59□□□□□ -0.71
C9orf3-211ENST00000463372 CHEK2O96017 543 aa10.59□□□□□ -0.71
C9orf3-211ENST00000463372 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms