RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TSSK2Q96PF2 358 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 COQ7Q99807 217 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 C19orf24Q9BVV8 132 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 IFT27Q9BW83 186 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 CDADC1Q9BWV3 514 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 TRIM15Q9C019 465 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 HDHD2Q9H0R4 259 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 OR52D1Q9H346 318 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 LPAR2Q9HBW0 351 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 MSL2Q9HCI7 577 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ACTR3BQ9P1U1 418 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 IL19Q9UHD0 177 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 NPTNQ9Y639 398 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 CACNG2Q9Y698 323 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 V9GYQ6 96 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 ANK2Q01484 3957 aa6.17□□□□□ -1.42
PTPRF-210ENST00000463041 PPIAL4EA0A075B759 164 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 PPIAL4CA0A0B4J2A2 164 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 A0A0G2JMP0 313 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 A0A0X1KG70 313 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 B2RBV5 119 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 PPIAL4DF5H284 164 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 DCTN6O00399 190 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 FOXH1O75593 365 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 PNPP00491 289 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 SBK2P0C263 348 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 PPIAL4FP0DN26 164 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 CPT2P23786 658 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 GYS2P54840 703 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 COX10Q12887 443 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 RSPO1Q2MKA7 263 aaPredicted RBP6.16□□□□□ -1.42
PTPRF-210ENST00000463041 RPL13AP3Q6NVV1 102 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 SHQ1Q6PI26 577 aaKnown RBP6.16□□□□□ -1.42
PTPRF-210ENST00000463041 Q6ZR03 302 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 RINLQ6ZS11 566 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 COLCA1Q6ZS62 124 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 LRRC28Q86X40 367 aaPredicted RBP6.16□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF283Q8N7M2 679 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 ATG16L2Q8NAA4 619 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 SLC26A10Q8NG04 563 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR8G5Q8NG78 346 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR2Z1Q8NG97 314 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR4M2Q8NGB6 313 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR2AJ1Q8NGZ0 328 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR13G1Q8NGZ3 307 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR4K13Q8NH42 304 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 FANK1Q8TC84 345 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 ST7LQ8TDW4 575 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 ZFAND2BQ8WV99 257 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 SLC7A6Q92536 515 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 CCT8L2Q96SF2 557 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 NMNAT3Q96T66 252 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 DDOQ99489 341 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 GAL3ST1Q99999 423 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 REPIN1Q9BWE0 567 aaKnown RBP6.16□□□□□ -1.42
PTPRF-210ENST00000463041 C1QTNF5Q9BXJ0 243 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 MUC13Q9H3R2 512 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OCEL1Q9H607 264 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 METTL17Q9H7H0 456 aaPredicted RBP6.16□□□□□ -1.42
PTPRF-210ENST00000463041 TMEM106BQ9NUM4 274 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 IL20Q9NYY1 176 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 KCNG2Q9UJ96 466 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 PCDHB10Q9UN67 800 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 POLR1DQ9Y2S0 133 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 LHFPL6Q9Y693 200 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
PTPRF-210ENST00000463041 OR6C68A6NDL8 312 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TNFRSF11BO00300 401 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 GPANK1O95872 356 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 GASTP01350 101 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 IGHV2-70P01814 119 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 DBHP09172 617 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF823P16415 610 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 SELEP16581 610 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TPTEP56180 551 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TRIM25Q14258 630 aaKnown RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 MEP1BQ16820 701 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 KRTAP27-1Q3LI81 207 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TMEM155Q4W5P6 130 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 SPRNQ5BIV9 151 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF362Q5T0B9 420 aaPredicted RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 DCAF12L2Q5VW00 463 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 OTPQ5XKR4 325 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 OR2T2Q6IF00 324 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 SLC18B1Q6NT16 456 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 PGBD2Q6P3X8 592 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 CORO6Q6QEF8 472 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF620Q6ZNG0 422 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 RASSF6Q6ZTQ3 369 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 USP43Q70EL4 1123 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 KLHL36Q8N4N3 616 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 SPICQ8N5J4 248 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 FITM2Q8N6M3 262 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 OR52L1Q8NGH7 329 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 OR52E2Q8NGJ4 325 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 NANPQ8TBE9 248 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF418Q8TF45 676 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms