RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CRIP3Q6Q6R5 217 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 METAP1DQ6UB28 335 aaPredicted RBP6.33□□□□□ -1.4
SMC3-202ENST00000462899 FBXW12Q6X9E4 464 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 PTOV1Q86YD1 416 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 C10orf53Q8N6V4 93 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 NFKBIDQ8NI38 313 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
SMC3-202ENST00000462899 GTF2H4Q92759 462 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 CMBLQ96DG6 245 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 RHOVQ96L33 236 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 PRSS27Q9BQR3 290 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 PCDHAC1Q9H158 963 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 EVA1AQ9H8M9 152 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 SLC25A37Q9NYZ2 338 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 NDRG4Q9ULP0 352 aaKnown RBP6.33□□□□□ -1.4
SMC3-202ENST00000462899 FOXJ3Q9UPW0 622 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 STARD10Q9Y365 291 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 TRBV5-3A0A0A0MS03 114 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 M0R3H8 397 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 CLIC1O00299 241 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 PPP1R3DO95685 299 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 IGF2P01344 180 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 RAC2P15153 192 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 GUCY1A3Q02108 690 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 MAB21L1Q13394 359 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 CEP85LQ5SZL2 805 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 LRIF1Q5T3J3 769 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 XP32Q5T750 250 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 REEP3Q6NUK4 255 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 Q6ZTK2 550 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 HDDC2Q7Z4H3 204 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 NANOGNBQ7Z5D8 188 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 MOGAT3Q86VF5 341 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 RANBP3LQ86VV4 465 aaPredicted RBP6.32□□□□□ -1.4
SMC3-202ENST00000462899 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 EIF1ADQ8N9N8 165 aaKnown RBP6.32□□□□□ -1.4
SMC3-202ENST00000462899 MNS1Q8NEH6 495 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 OR8G5Q8NG78 346 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 GPR32P1Q8NGA4 272 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 OR4D11Q8NGI4 311 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 OR6T1Q8NGN1 323 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 OR9I1Q8NGQ6 314 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 LRRC8CQ8TDW0 803 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 UBLCP1Q8WVY7 318 aaPredicted RBP6.32□□□□□ -1.4
SMC3-202ENST00000462899 LIPHQ8WWY8 451 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SGCDQ92629 289 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 LHX4Q969G2 390 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 ITCHQ96J02 903 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
SMC3-202ENST00000462899 MAGEB18Q96M61 343 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SPATA5L1Q9BVQ7 753 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 MMP28Q9H239 520 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 KCNN2Q9H2S1 579 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 IKZF5Q9H5V7 419 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SDR39U1Q9NRG7 319 aaPredicted RBP6.32□□□□□ -1.4
SMC3-202ENST00000462899 PNPOQ9NVS9 261 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SELENONQ9NZV5 590 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 SIGLEC9Q9Y336 463 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 TIMM10BQ9Y5J6 103 aa6.32□□□□□ -1.4
SMC3-202ENST00000462899 A0A1W2PRG6 482 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 PRORSD1PA6NEY8 169 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 OR6C6A6NF89 314 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 IQCF6A8MYZ5 107 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 F5H5P2 479 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 SLC22A3O75751 556 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 ANP32DO95626 131 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 PTBP3O95758 552 aaKnown RBP6.31□□□□□ -1.4
SMC3-202ENST00000462899 MPIG6BO95866 241 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 OPN1SWP03999 348 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 FBP1P09467 338 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 BGNP21810 368 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 GABRA5P31644 462 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 KIR2DS4P43632 304 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 SLC1A6P48664 564 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 SRP9P49458 86 aaKnown RBP6.31□□□□□ -1.4
SMC3-202ENST00000462899 DAP3P51398 398 aaKnown RBP6.31□□□□□ -1.4
SMC3-202ENST00000462899 CDK6Q00534 326 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 SGCAQ16586 387 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 DUSP7Q16829 419 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 RUNDC3AQ59EK9 446 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 ENTPD8Q5MY95 495 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 GCNT6Q5T4J0 391 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 METTL11BQ5VVY1 283 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 C11orf88Q6PI97 169 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 ARL9Q6T311 187 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 IGFN1Q86VF2 1251 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 NUDCD3Q8IVD9 361 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 KIRREL3Q8IZU9 778 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 C1orf87Q8N0U7 546 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 OR5AS1Q8N127 324 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 KLHDC1Q8N7A1 406 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 CELF2-AS1Q8N7Q2 184 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 C11orf44Q8N8P7 122 aa6.31□□□□□ -1.4
SMC3-202ENST00000462899 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms