RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TOMM34Q15785 309 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MIDNQ504T8 468 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SPIN4Q56A73 249 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF628Q5EBL2 1059 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SPANXN4Q5MJ08 99 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 KDM4DQ6B0I6 523 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5M10Q6IEU7 315 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 RPL13AP3Q6NVV1 102 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC48A1Q6P1K1 146 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM107Q6UX40 140 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TMPRSS11FQ6ZWK6 438 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 NDUFAF7Q7L592 441 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GDPD3Q7L5L3 318 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PAGE2Q7Z2X7 111 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CAMKMTQ7Z624 323 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 DPPA2Q7Z7J5 298 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 HMGN2P46Q86SG4 172 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 FUNDC1Q8IVP5 155 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GID4Q8IVV7 300 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 RIMKLAQ8IXN7 391 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 C9orf40Q8IXQ3 194 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SPAG16Q8N0X2 631 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PGAM4Q8N0Y7 254 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 BEST3Q8N1M1 668 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF786Q8N393 782 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GALNT16Q8N428 558 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PARP16Q8N5Y8 322 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 HORMAD2Q8N7B1 307 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 APCDD1LQ8NCL9 501 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CHDHQ8NE62 594 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR7G2Q8NG99 324 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR4K14Q8NGD5 310 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR6M1Q8NGM8 313 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5AK3PQ8NH89 298 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 DYNC2LI1Q8TCX1 351 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF721Q8TF20 911 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 DUSP19Q8WTR2 217 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 METTL21AQ8WXB1 218 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 RIT1Q92963 219 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TMBIM1Q969X1 311 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ARSGQ96EG1 525 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 WBP1Q96G27 269 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 C16orf58Q96GQ5 468 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SENP5Q96HI0 755 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 HARBI1Q96MB7 349 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 DGAT2Q96PD7 388 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR1F2PQ96R84 312 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GAL3ST4Q96RP7 486 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 KCNS3Q9BQ31 491 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TTYH2Q9BSA4 534 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 COPS4Q9BT78 406 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TMED9Q9BVK6 235 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 LHPPQ9H008 270 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SEMA6AQ9H2E6 1030 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GLIPR2Q9H4G4 154 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 REEP4Q9H6H4 257 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ESRP2Q9H6T0 727 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MYNNQ9NPC7 610 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CTPS2Q9NRF8 586 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SERINC1Q9NRX5 453 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PLSCR3Q9NRY6 295 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 C14orf105Q9NVL8 296 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 AIG1Q9NVV5 245 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 KLHL9Q9P2J3 617 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SCP2D1Q9UJQ7 156 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZGRF1Q86YA3 2104 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CPAMD8Q8IZJ3 1885 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 DNAJC13O75165 2243 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A0B4J293 547 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 LOC100506127A0A0U1RQW1 187 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1W2PN81 502 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ASPDHA6ND91 283 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CLDN24A6NM45 220 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 A8MXK9 166 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 G3V2T6 193 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SCAMP2O15127 329 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 TCAPO15273 167 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 AKR7A2O43488 359 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 GPRIN2O60269 458 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 RGS11O94810 467 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 AHSA1O95433 338 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 HPP00738 406 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 RAF1P04049 648 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 IGKV3-11P04433 115 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 HIST1H2ABP04908 130 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SERPINA7P05543 415 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CRHP06850 196 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC35E2P0CK97 266 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ADORA3P0DMS8 318 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FOLR2P14207 255 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 DAOP14920 347 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF250P15622 560 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ANXA7P20073 488 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF10P21506 573 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 GPX3P22352 226 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms