RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 HIST2H3PS2Q5TEC6 136 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 FBXW12Q6X9E4 464 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 HIST2H3AQ71DI3 136 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 GJC3Q8NFK1 279 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 OR5L1Q8NGL2 311 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 OR52J3Q8NH60 311 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 ITLN1Q8WWA0 313 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 APOBEC3DQ96AK3 386 aaPredicted RBP19.21■□□□□ 0.67
PTPN4-207ENST00000460162 GPA33Q99795 319 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 NSRP1Q9H0G5 558 aaKnown RBP19.21■□□□□ 0.67
PTPN4-207ENST00000460162 PPP1R3CQ9UQK1 317 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 LHFPL6Q9Y693 200 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 V9GYQ6 96 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 ARHGAP32A7KAX9 2087 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 IGLV1-36A0A0B4J1U3 117 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 ARPC3O15145 178 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 GADD45GO95257 159 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 DBHP09172 617 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 HSD17B1P14061 328 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 FPR3P25089 353 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 SLC6A6P31641 620 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 ACTG1P63261 375 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 SPIBQ01892 262 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 JAZF1Q86VZ6 243 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 FAM216AQ8WUB2 273 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 PYURFQ96I23 114 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 TSSK2Q96PF2 358 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 ERMAPQ96PL5 475 aaPredicted RBP19.2■□□□□ 0.66
PTPN4-207ENST00000460162 OR2V2Q96R30 315 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 SIGLEC11Q96RL6 698 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 RBM4Q9BWF3 364 aaKnown RBP19.2■□□□□ 0.66
PTPN4-207ENST00000460162 OR52D1Q9H346 318 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 PATZ1Q9HBE1 687 aaKnown RBP19.2■□□□□ 0.66
PTPN4-207ENST00000460162 OPN4Q9UHM6 478 aa19.2■□□□□ 0.66
PTPN4-207ENST00000460162 A8MXK9 166 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 IFNL4K9M1U5 179 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 DCTN6O00399 190 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 SBK2P0C263 348 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 MMP16P51512 607 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 COX10Q12887 443 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 HNRNPA0Q13151 305 aaKnown RBP19.19■□□□□ 0.66
PTPN4-207ENST00000460162 RFX4Q33E94 735 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 SLC27A4Q6P1M0 643 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 BPIFB2Q8N4F0 458 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 PTTG3PQ9NZH4 202 aa19.19■□□□□ 0.66
PTPN4-207ENST00000460162 POLR3KQ9Y2Y1 108 aaPredicted RBP19.19■□□□□ 0.66
PTPN4-207ENST00000460162 SNX3O60493 162 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 RENP00797 406 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 ZFP36P26651 326 aaKnown RBP19.18■□□□□ 0.66
PTPN4-207ENST00000460162 CENPAP49450 140 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 COMPP49747 757 aaPredicted RBP19.18■□□□□ 0.66
PTPN4-207ENST00000460162 ZMYND11Q15326 602 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 MEP1BQ16820 701 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 LEG1Q6P5S2 330 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 LRRC28Q86X40 367 aaPredicted RBP19.18■□□□□ 0.66
PTPN4-207ENST00000460162 PGAM4Q8N0Y7 254 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 MUC20Q8N307 709 aaPredicted RBP19.18■□□□□ 0.66
PTPN4-207ENST00000460162 SLC26A10Q8NG04 563 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 OR8G5Q8NG78 346 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 POP5Q969H6 163 aaKnown RBP19.18■□□□□ 0.66
PTPN4-207ENST00000460162 MCUR1Q96AQ8 359 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 SLC6A7Q99884 636 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 FAM107BQ9H098 131 aa19.18■□□□□ 0.66
PTPN4-207ENST00000460162 F5H0A9 414 aaPredicted RBP19.17■□□□□ 0.66
PTPN4-207ENST00000460162 OR10H3O60404 316 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 GPANK1O95872 356 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 IFNGR2P38484 337 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 MDH2P40926 338 aaKnown RBP19.17■□□□□ 0.66
PTPN4-207ENST00000460162 HLXQ14774 488 aaPredicted RBP19.17■□□□□ 0.66
PTPN4-207ENST00000460162 SAMD4BQ5PRF9 694 aaKnown RBP19.17■□□□□ 0.66
PTPN4-207ENST00000460162 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.17■□□□□ 0.66
PTPN4-207ENST00000460162 OR5AS1Q8N127 324 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 OR6V1Q8N148 313 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 DEFB108BQ8NET1 73 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 OR10AD1Q8NGE0 317 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 NSMCE2Q96MF7 247 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 NMNAT3Q96T66 252 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 GCM1Q9NP62 436 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 B9D1Q9UPM9 204 aa19.17■□□□□ 0.66
PTPN4-207ENST00000460162 IQCF6A8MYZ5 107 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 TMEM178BH3BS89 294 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 ARPC2O15144 300 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 ATP8B1O43520 1251 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 FABP3P05413 133 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 HIST1H1CP16403 213 aaKnown RBP19.16■□□□□ 0.66
PTPN4-207ENST00000460162 CFPP27918 469 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 SLC6A9P48067 706 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 OR2T2Q6IF00 324 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 ZBTB46Q86UZ6 589 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 ATG16L2Q8NAA4 619 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 OR13G1Q8NGZ3 307 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 ZNF582Q96NG8 517 aaPredicted RBP19.16■□□□□ 0.66
PTPN4-207ENST00000460162 IFT27Q9BW83 186 aa19.16■□□□□ 0.66
PTPN4-207ENST00000460162 IDH3BO43837 385 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 ZNF12P17014 697 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 CPT2P23786 658 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 FPR2P25090 351 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 NOS3P29474 1203 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 RRM2P31350 389 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 GSSP48637 474 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms