RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 INS-IGF2F8WCM5 200 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 ANGPTL7O43827 346 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SPAG7O75391 227 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SERPINE2P07093 398 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 CLTAP09496 248 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 VSX2P58304 361 aaPredicted RBP3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SP4Q02446 784 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 GNA13Q14344 377 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 PGGHGQ32M88 737 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 OR52W1Q6IF63 320 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 Q6P435 159 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 MICU2Q8IYU8 434 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 COMMD1Q8N668 190 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 PQLC3Q8N755 202 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 TTC29Q8NA56 475 aaPredicted RBP3.51□□□□□ -1.85
CCDC50-203ENST00000460064 NUBPLQ8TB37 319 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SDHCQ99643 169 aaPredicted RBP3.51□□□□□ -1.85
CCDC50-203ENST00000460064 MICU1Q9BPX6 476 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 SLC40A1Q9NP59 571 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 ISYNA1Q9NPH2 558 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 LZTFL1Q9NQ48 299 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 MTCH1Q9NZJ7 389 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 UVRAGQ9P2Y5 699 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 CD300AQ9UGN4 299 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 TBC1D24Q9ULP9 559 aa3.51□□□□□ -1.85
CCDC50-203ENST00000460064 PRRC2AP48634 2157 aaKnown RBP3.51□□□□□ -1.85
CCDC50-203ENST00000460064 IGLV3-16A0A075B6K0 115 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 KBTBD11-OT1A0A1B0GTJ5 212 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 A0A1B0GW55 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 IQCF5A8MTL0 148 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L2P0CJ85 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L3P0CJ86 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L5P0CJ88 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L6P0CJ89 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L7P0CJ90 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 GGT1P19440 569 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 HOXA6P31267 233 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 CEACAM3P40198 252 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 CSNK1A1P48729 337 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 MNAT1P51948 309 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ILKQ13418 452 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 RGNQ15493 299 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF726P1Q15940 193 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF829Q3KNS6 432 aaPredicted RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 C8orf74Q6P047 294 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4L9Q6RFH8 374 aaPredicted RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ARL9Q6T311 187 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 OR9G4Q8NGQ1 327 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 PDCD6IPQ8WUM4 868 aaKnown RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ASZ1Q8WWH4 475 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 BBS2Q9BXC9 721 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 SLC17A9Q9BYT1 436 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ZYG11BQ9C0D3 744 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 ACTR3CQ9C0K3 210 aaPredicted RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 NOX3Q9HBY0 568 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 AGPAT4Q9NRZ5 378 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 MRPL22Q9NWU5 206 aaKnown RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 PDP1Q9P0J1 537 aaPredicted RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 STX18Q9P2W9 335 aaKnown RBP3.5□□□□□ -1.85
CCDC50-203ENST00000460064 DUX4Q9UBX2 424 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 CLN8Q9UBY8 286 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 OR12D3Q9UGF7 316 aa3.5□□□□□ -1.85
CCDC50-203ENST00000460064 IGHV3-66A0A0C4DH42 116 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ERICH2A1L162 156 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ANKRD63C9JTQ0 380 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF701M0R085 212 aaPredicted RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 PSMD11O00231 422 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 CD160O95971 181 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 HLA-DPB1P04440 258 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ARG1P05089 322 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 HOXC4P09017 264 aaPredicted RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 SRMP19623 302 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 AZU1P20160 251 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 WARSP23381 471 aaKnown RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 OR1E1P30953 314 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 EVI2BP34910 448 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 SLC1A2P43004 574 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 GPR4P46093 362 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 RPS5P46782 204 aaKnown RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF138P52744 262 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 SARNPP82979 210 aaKnown RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ERCC8Q13216 396 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 FAM83EQ2M2I3 478 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 HNRNPA1L2Q32P51 320 aaKnown RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 FAM173BQ6P4H8 233 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 SPESP1Q6UW49 350 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 FAM92BQ6ZTR7 304 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 C12orf56Q8IXR9 622 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 PRSS58Q8IYP2 241 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 DNAAF3Q8N9W5 541 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 OR5K2Q8NHB8 316 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 MITD1Q8WV92 249 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF414Q96IQ9 312 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 UCK2Q9BZX2 261 aa3.49□□□□□ -1.85
CCDC50-203ENST00000460064 PARP12Q9H0J9 701 aaKnown RBP3.49□□□□□ -1.85
CCDC50-203ENST00000460064 ELOVL6Q9H5J4 265 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms