RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 IGHV3-13P01766 116 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 SPI1P17947 270 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 FMO3P31513 532 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 COX10Q12887 443 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 GINS1Q14691 196 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 TRIP10Q15642 601 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 TMEM255AQ5JRV8 349 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 SPATC1Q76KD6 591 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 ZNF511Q8NB15 262 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 ZNF540Q8NDQ6 660 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 RDH5Q92781 318 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 YIPF5Q969M3 257 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 CMBLQ96DG6 245 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 WDR76Q9H967 626 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 N6AMT1Q9Y5N5 214 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 ARRDC5A6NEK1 342 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 ZSCAN5BA6NJL1 495 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 IGHV4-31P0DP07 118 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 ANXA8P13928 327 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 HOXB4P17483 251 aaPredicted RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 GRK5P34947 590 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 GPR6P46095 362 aaPredicted RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 PRSS12P56730 875 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 HLXQ14774 488 aaPredicted RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 TAF13Q15543 124 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 MBNL2Q5VZF2 373 aaKnown RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 SLC27A4Q6P1M0 643 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 USP51Q70EK9 711 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 ZNF771Q7L3S4 317 aaPredicted RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 POM121Q96HA1 1249 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 PLEKHA8Q96JA3 519 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 COQ7Q99807 217 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 ATF6BQ99941 703 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 RBM4Q9BWF3 364 aaKnown RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 OR51V1Q9H2C8 321 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 CHODLQ9H9P2 273 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 SAP30LQ9HAJ7 183 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 ZNF275Q9NSD4 429 aaPredicted RBP15.94■□□□□ 0.14
USP39-209ENST00000458268 TBCCD1Q9NVR7 557 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 COMMD3-BMI1R4GMX3 469 aa15.94■□□□□ 0.14
USP39-209ENST00000458268 IGHV1-46P01743 117 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 OSMP13725 252 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 PAICSP22234 425 aaKnown RBP15.93■□□□□ 0.14
USP39-209ENST00000458268 GGT2P36268 569 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 SLC6A9P48067 706 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 HIST1H3AP68431 136 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 PSG7Q13046 419 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 PCGF3Q3KNV8 242 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 KLHL12Q53G59 568 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 ZNF362Q5T0B9 420 aaPredicted RBP15.93■□□□□ 0.14
USP39-209ENST00000458268 AVPI1Q5T686 147 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 HIST2H3PS2Q5TEC6 136 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 TMEM236Q5W0B7 351 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 CYB5R2Q6BCY4 276 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 ACSM5Q6NUN0 579 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 CD300LDQ6UXZ3 194 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 HIST2H3AQ71DI3 136 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 DCXRQ7Z4W1 244 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 AMIGO2Q86SJ2 522 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 ERI1Q8IV48 349 aaKnown RBP15.93■□□□□ 0.14
USP39-209ENST00000458268 PAPD5Q8NDF8 572 aaKnown RBP15.93■□□□□ 0.14
USP39-209ENST00000458268 OR6N2Q8NGY6 317 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 HCAR1Q9BXC0 346 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 CMC2Q9NRP2 79 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 CENPMQ9NSP4 180 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 CYB5R1Q9UHQ9 305 aa15.93■□□□□ 0.14
USP39-209ENST00000458268 FN1P02751 2386 aaKnown RBP15.93■□□□□ 0.14
USP39-209ENST00000458268 LCATP04180 440 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 PSKH1P11801 424 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 ZNF23P17027 643 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 ACHEP22303 614 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 RGS6P49758 472 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 ENTPD1P49961 510 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 RPS7P62081 194 aaKnown RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 MVKQ03426 396 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 PLBD1Q6P4A8 553 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 SHQ1Q6PI26 577 aaKnown RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 C1orf174Q8IYL3 243 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 BHLHE23Q8NDY6 225 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 OR5L1Q8NGL2 311 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 OR5K1Q8NHB7 308 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 APOBEC3DQ96AK3 386 aaPredicted RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 MAP6Q96JE9 813 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 DDOQ99489 341 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 COPS4Q9BT78 406 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 MMADHCQ9H3L0 296 aaPredicted RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 NTN4Q9HB63 628 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 PAPOLBQ9NRJ5 636 aaKnown RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 KCNG2Q9UJ96 466 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 PURGQ9UJV8 347 aaKnown RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 AP4S1Q9Y587 144 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 CACNG2Q9Y698 323 aa15.92■□□□□ 0.14
USP39-209ENST00000458268 NSD1Q96L73 2696 aaPredicted RBP15.92■□□□□ 0.14
USP39-209ENST00000458268 IGHV1-69-2A0A0G2JMI3 117 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 LOC100289279A0A1B0GTE1 492 aa15.91■□□□□ 0.14
USP39-209ENST00000458268 A8MV72 311 aaPredicted RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 PRR23D1E9PI22 279 aaPredicted RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 ZNF593O00488 134 aaPredicted RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 PRR23D2P0DMB1 279 aaPredicted RBP15.91■□□□□ 0.14
USP39-209ENST00000458268 FASP25445 335 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms