RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 DCAF16Q9NXF7 216 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 TAGLN3Q9UI15 199 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 MAGEL2Q9UJ55 1249 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 KLHL21Q9UJP4 597 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 TRRAPQ9Y4A5 3859 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 OR6C6A6NF89 314 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 OR10H3O60404 316 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 FOXH1O75593 365 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 GADD45GO95257 159 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 GPANK1O95872 356 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 FAM107AO95990 144 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 RENP00797 406 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 AVPP01185 164 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 DBHP09172 617 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 KITLGP21583 273 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 GATA3P23771 443 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 NOS3P29474 1203 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 SLC6A6P31641 620 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 RGS6P49758 472 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 MXRA7P84157 204 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 MEP1BQ16820 701 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 AWAT1Q58HT5 328 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 PGM2L1Q6PCE3 622 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 C1orf229Q6ZS94 237 aaPredicted RBP13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 ATG16L2Q8NAA4 619 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 CCDC197Q8NCU1 140 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 NANPQ8TBE9 248 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 FAM216AQ8WUB2 273 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 PTP4A1Q93096 173 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 PYURFQ96I23 114 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 NSMCE2Q96MF7 247 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 OR2V2Q96R30 315 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 JMJD8Q96S16 334 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 IFT27Q9BW83 186 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
CHCHD3-204ENST00000457942 CDKN2AP42771 156 aaKnown RBP13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 ERFP50548 548 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 FXYD6P3P58550 94 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 HILS1P60008 231 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 HLXQ14774 488 aaPredicted RBP13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 Q6ZR03 302 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 FITM2Q8N6M3 262 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 GJC3Q8NFK1 279 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 OR10AD1Q8NGE0 317 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 SAMD8Q96LT4 415 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 SUCNR1Q9BXA5 334 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 HDHD2Q9H0R4 259 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 OR52D1Q9H346 318 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 IL19Q9UHD0 177 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 ATPIF1Q9UII2 106 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
CHCHD3-204ENST00000457942 J3QW42 95 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 TMPRSS2O15393 492 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 TXNDC12O95881 172 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 IGHV2-70P01814 119 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 FABP3P05413 133 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 RAC2P15153 192 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 RBMXP38159 391 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 IFNGR2P38484 337 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 BTG1P62324 171 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 SAMD4BQ5PRF9 694 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 OR2T2Q6IF00 324 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 BHLHE23Q8NDY6 225 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 OR4K13Q8NH42 304 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 APOBEC3DQ96AK3 386 aaPredicted RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 HAVCR1Q96D42 359 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 DHRS1Q96LJ7 313 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 ZNF582Q96NG8 517 aaPredicted RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 NMNAT3Q96T66 252 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 GPA33Q99795 319 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 COQ7Q99807 217 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 RBM4Q9BWF3 364 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 GORASP2Q9H8Y8 452 aa13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 SRA1Q9HD15 236 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 RPRD1BQ9NQG5 326 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-204ENST00000457942 DCTN6O00399 190 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 ARPC2O15144 300 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 FPR3P25089 353 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 RRM2P31350 389 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 KCNMB1Q16558 191 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 RFX4Q33E94 735 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 MIDNQ504T8 468 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC27A4Q6P1M0 643 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 USP43Q70EL4 1123 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 LINC00346Q8IVM7 164 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 PGAM4Q8N0Y7 254 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms