RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 OR6X1Q8NH79 312 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 MARS2Q96GW9 593 aaKnown RBP11.05□□□□□ -0.64
SNHG17-208ENST00000456953 MOGAT1Q96PD6 335 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 S100A14Q9HCY8 104 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 NOX4Q9NPH5 578 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 DCAF16Q9NXF7 216 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 DNAJB9Q9UBS3 223 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 TMCC3Q9ULS5 477 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 LRCH1Q9Y2L9 728 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 SAMHD1Q9Y3Z3 626 aaKnown RBP11.05□□□□□ -0.64
SNHG17-208ENST00000456953 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
SNHG17-208ENST00000456953 A0A1W2PRQ8 180 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 TNFRSF11BO00300 401 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 DHHO43323 396 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 BAG2O95816 211 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 CPT2P23786 658 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 MPV17P39210 176 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
SNHG17-208ENST00000456953 PAX2Q02962 417 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 DGCR6Q14129 220 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 SPRNQ5BIV9 151 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 THEM4Q5T1C6 240 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ZNF730Q6ZMV8 503 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 Q6ZPA2 131 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 C1orf174Q8IYL3 243 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ZNF283Q8N7M2 679 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 OR10S1Q8NGN2 331 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
SNHG17-208ENST00000456953 KLF14Q8TD94 323 aaPredicted RBP11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ZNF566Q969W8 418 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 CHIAQ9BZP6 476 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 SLC19A3Q9BZV2 496 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ANKRD19PQ9H560 264 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 TCF7L1Q9HCS4 588 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 EIF3KQ9UBQ5 218 aaKnown RBP11.04□□□□□ -0.64
SNHG17-208ENST00000456953 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
SNHG17-208ENST00000456953 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 H3BSA7 217 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 KPNA4O00629 521 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 CLPXO76031 633 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 LYPD3O95274 346 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 THY1P04216 161 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 CCNOP22674 350 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 RBM34P42696 430 aaKnown RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 ARHGDIAP52565 204 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 PROK1P58294 105 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 BPIFB3P59826 476 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 TNFAIP6P98066 277 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 HSF2Q03933 536 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 HNRNPA0Q13151 305 aaKnown RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 ATP6AP1Q15904 470 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 C2orf68Q2NKX9 166 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 BEAN1Q3B7T3 259 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 Q6YL49 198 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 SLC35D2Q76EJ3 337 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 NKAIN4Q8IVV8 208 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 ZNF101Q8IZC7 436 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 C10orf53Q8N6V4 93 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 TMEM255BQ8WV15 326 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 TMEM239Q8WW34 195 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 ACOT11Q8WXI4 607 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 DHRS1Q96LJ7 313 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 KRCC1Q9NPI7 259 aaPredicted RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 RRP15Q9Y3B9 282 aaKnown RBP11.03□□□□□ -0.64
SNHG17-208ENST00000456953 MED31Q9Y3C7 131 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 POMT1Q9Y6A1 747 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 U3KQV3 271 aa11.03□□□□□ -0.64
SNHG17-208ENST00000456953 IGHV2-70DA0A0C4DH43 119 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 C5orf63A6NC05 138 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 LRRN3E7EW58 273 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 C11orf98E9PRG8 122 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 H3BNX3 289 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 MGRN1O60291 552 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 OR6A2O95222 327 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 MT-ATP6P00846 226 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 MMP7P09237 267 aaPredicted RBP11.02□□□□□ -0.65
SNHG17-208ENST00000456953 ADORA3P0DMS8 318 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 STOMP27105 288 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 MDH2P40926 338 aaKnown RBP11.02□□□□□ -0.65
SNHG17-208ENST00000456953 WNT5AP41221 380 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 CDK5R2Q13319 367 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 RCN1Q15293 331 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
SNHG17-208ENST00000456953 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 AMIGO2Q86SJ2 522 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 MUC20Q8N307 709 aaPredicted RBP11.02□□□□□ -0.65
SNHG17-208ENST00000456953 OR5J2Q8NH18 312 aa11.02□□□□□ -0.65
SNHG17-208ENST00000456953 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms