RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BDH1Q02338 343 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 PLP2Q04941 152 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 PIGFQ07326 219 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 ZNF774Q6NX45 483 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 TMPRSS11AQ6ZMR5 421 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 LHFPL3Q86UP9 236 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 KLHL36Q8N4N3 616 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 SNX33Q8WV41 574 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-206ENST00000454852 POM121L2Q96KW2 1035 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 DACH2Q96NX9 599 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 TBX5Q99593 518 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 MND1Q9BWT6 205 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 RNF121Q9H920 327 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 ELOVL3Q9HB03 270 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 ACOT13Q9NPJ3 140 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 SLCO1C1Q9NYB5 712 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 NDRG3Q9UGV2 375 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 CLEC2DQ9UHP7 191 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 SNX5Q9Y5X3 404 aa9.78□□□□□ -0.84
TRAF4-206ENST00000454852 IQCMA0A1B0GVH7 501 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 MYL12BO14950 172 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 MT-ND5P03915 603 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 H2BFMP0C1H6 154 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 SMIM18P0DKX4 95 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 STOMP27105 288 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 TGM4P49221 684 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 RIDAP52758 137 aaKnown RBP9.77□□□□□ -0.85
TRAF4-206ENST00000454852 WNT4P56705 351 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 OR12D2P58182 307 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 PSMA6P60900 246 aaKnown RBP9.77□□□□□ -0.85
TRAF4-206ENST00000454852 TUBA1BP68363 451 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 EMX1Q04741 257 aaPredicted RBP9.77□□□□□ -0.85
TRAF4-206ENST00000454852 CCDC58Q4VC31 144 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 UBE2UQ5VVX9 321 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 LIPNQ5VXI9 398 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 DRAM2Q6UX65 266 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 LRRN1Q6UXK5 716 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 COLCA1Q6ZS62 124 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 TUBA1AQ71U36 451 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 PRSS45Q7RTY3 260 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 KRT77Q7Z794 578 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 OR1J2Q8NGS2 313 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 AKR7LQ8NHP1 331 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 RPS4Y2Q8TD47 263 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 SPTSSAQ969W0 71 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 PELI1Q96FA3 418 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 C4orf36Q96KX1 117 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 WFIKKN1Q96NZ8 548 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 NGBQ9NPG2 151 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 BABAM2Q9NXR7 383 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 NPAP1Q9NZP6 1156 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 LRP12Q9Y561 859 aa9.77□□□□□ -0.85
TRAF4-206ENST00000454852 FLNCQ14315 2725 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 IGHV1-18A0A0C4DH31 117 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 A0A1W2PR80 420 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 CD1AP06126 327 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 RNF224P0DH78 156 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF35P13682 527 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 JUNBP17275 347 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 PTAFRP25105 342 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 PCSK6P29122 969 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 HTR5AP47898 357 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 CCR9P51686 369 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 CDH15P55291 814 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 TPTEP56180 551 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 TAS2R43P59537 309 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 RAB39AQ14964 217 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 SPHARQ15513 63 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 TP53I3Q53FA7 332 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 OR2G6Q5TZ20 316 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 XAF1Q6GPH4 301 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 TMEM154Q6P9G4 183 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF367Q7RTV3 350 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 FAM220AQ7Z4H9 259 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 DMRTC2Q8IXT2 367 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 C1orf174Q8IYL3 243 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 SLC30A7Q8NEW0 376 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 SPRYD4Q8WW59 207 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 RORBQ92753 470 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 ITFG2Q969R8 447 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 DOK1Q99704 481 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 MED18Q9BUE0 208 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 CCDC90BQ9GZT6 254 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 MOB1AQ9H8S9 216 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 SP140LQ9H930 580 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 ISG20L2Q9H9L3 353 aaKnown RBP9.76□□□□□ -0.85
TRAF4-206ENST00000454852 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 CENPMQ9NSP4 180 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 FAM206AQ9NX38 181 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 IKZF2Q9UKS7 526 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 R4GMQ9 66 aa9.76□□□□□ -0.85
TRAF4-206ENST00000454852 TUBAL3A6NHL2 446 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms