RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 B3GNT2Q9NY97 397 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 GNG8Q9UK08 70 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ERGIC3Q9Y282 383 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 POLR1DQ9Y2S0 133 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CAB39Q9Y376 341 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 LRP12Q9Y561 859 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 USP9XQ93008 2570 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 CIB4A0PJX0 185 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 MYL12BO14950 172 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 SRSF10O75494 262 aaKnown RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 CNOT4O95628 575 aaKnown RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 CELA3BP08861 270 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 HSMCR30P0CW71 290 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 GRNP28799 593 aaKnown RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 OPRL1P41146 370 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 GUCA1AP43080 201 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ACTC1P68032 377 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ACTA1P68133 377 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ROM1Q03395 351 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 MFGE8Q08431 387 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 AQP6Q13520 282 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 SNTB1Q13884 538 aaKnown RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 SSX1Q16384 188 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 CNPY1Q3B7I2 92 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 LIPNQ5VXI9 398 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 BEND4Q6ZU67 534 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF367Q7RTV3 350 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF584Q8IVC4 421 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 OR2AJ1Q8NGZ0 328 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 OR52N1Q8NH53 320 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF420Q8TAQ5 688 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 SNX33Q8WV41 574 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 MGLLQ99685 303 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 OR2H1Q9GZK4 316 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 C1orf198Q9H425 327 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 CHCHD3Q9NX63 227 aaKnown RBP9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ST6GALNAC2Q9UJ37 374 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 IKZF2Q9UKS7 526 aa9.57□□□□□ -0.88
SCN9A-205ENST00000454569 ICE1Q9Y2F5 2266 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 METTL15A6NJ78 407 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 FAM90A27PA6NNH2 459 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 DVL2O14641 736 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 SYNGR3O43761 229 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 SLC2A1P11166 492 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 CD79AP11912 226 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 CCL2P13500 99 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 TGFBR2P37173 567 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 CAPZA2P47755 286 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 PRKXP51817 358 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 RAB1AP62820 205 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 TIGD6Q17RP2 521 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ARMCX4Q5H9R4 360 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 BHLHA15Q7RTS1 189 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ABHD12BQ7Z5M8 362 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 KRT77Q7Z794 578 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 MRGPRGQ86SM5 289 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 MDP1Q86V88 176 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF679Q8IYX0 411 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 YIPF7Q8N8F6 280 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 GJC3Q8NFK1 279 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 S100PBPQ96BU1 408 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ISOC1Q96CN7 298 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 COG8Q96MW5 612 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 DCLRE1CQ96SD1 692 aaKnown RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 MNTQ99583 582 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 NAA50Q9GZZ1 169 aaKnown RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 PIGMQ9H3S5 423 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 SLC17A5Q9NRA2 495 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 BABAM2Q9NXR7 383 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 GALNT8Q9NY28 637 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF319Q9P2F9 582 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ERRFI1Q9UJM3 462 aaPredicted RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 TMEM14AQ9Y6G1 99 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 MYO18BQ8IUG5 2567 aa9.56□□□□□ -0.88
SCN9A-205ENST00000454569 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF701M0R085 212 aaPredicted RBP9.55□□□□□ -0.88
SCN9A-205ENST00000454569 SGCEO43556 437 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 ZG16O60844 167 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 TMCC2O75069 709 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 RNF224P0DH78 156 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 APEX1P27695 318 aaKnown RBP9.55□□□□□ -0.88
SCN9A-205ENST00000454569 MAGEB1P43366 347 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 KIR3DL2P43630 455 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 GALK2Q01415 458 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 EGR3Q06889 387 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 INSL4Q14641 139 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 P2RY6Q15077 328 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 TSTQ16762 297 aaKnown RBP9.55□□□□□ -0.88
SCN9A-205ENST00000454569 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 ELFN2Q5R3F8 820 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 SYS1Q8N2H4 156 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 PRSS35Q8N3Z0 413 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 BOD1Q96IK1 185 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 FUNDC2Q9BWH2 189 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 RNF121Q9H920 327 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 BRD7Q9NPI1 651 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms