RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TMEM81Q6P7N7 255 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF704Q6ZNC4 412 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-213ENST00000454468 ANGPTL5Q86XS5 388 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 FAM219AQ8IW50 185 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 WDR89Q96FK6 387 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-213ENST00000454468 LRFN5Q96NI6 719 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 NECAB3Q96P71 396 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-213ENST00000454468 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF436Q9C0F3 470 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-213ENST00000454468 RDH8Q9NYR8 311 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 LOC100289279A0A1B0GTE1 492 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 FADS1O60427 444 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 JMJD7P0C870 316 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 PATE4P0C8F1 98 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 LAP3P28838 519 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 APOBEC1P41238 236 aaKnown RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 GRK1Q15835 563 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 RNASE10Q5GAN6 216 aaKnown RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 FNDC7Q5VTL7 733 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 GVQW1Q8N7I0 195 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 LRRC75AQ8NAA5 344 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 SLC26A10Q8NG04 563 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 SC5DO75845 299 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 TCN2P20062 427 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 BTCP35070 178 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 SORDQ00796 357 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 TAGLNQ01995 201 aaKnown RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 RHOUQ7L0Q8 258 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 RABEPKQ7Z6M1 372 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 TCTE3Q8IZS6 198 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 SOX7Q9BT81 388 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 GON7Q9BXV9 100 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF768Q9H5H4 540 aaKnown RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 NIPAL2Q9H841 368 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF701Q9NV72 531 aaPredicted RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 PCDHGA5Q9Y5G8 931 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF407Q9C0G0 2248 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 ROS1P08922 2347 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 CTAG2O75638 210 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 PGAM2P15259 253 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 GNB3P16520 340 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 KLF9Q13886 244 aaPredicted RBP10.7□□□□□ -0.7
SMPD4-213ENST00000454468 MFSD13AQ14CX5 517 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 TMEM244Q5VVB8 128 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 NLRC3Q7RTR2 1065 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 OR52N4Q8NGI2 321 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 RNF128Q8TEB7 428 aa10.7□□□□□ -0.7
SMPD4-213ENST00000454468 TMEM272A0A1B0GTI8 110 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 MS4A18H0YCH9 400 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 RGS13O14921 159 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 MS4A18Q3C1V0 323 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 CFAP77Q6ZQR2 320 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 TEX19Q8NA77 164 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 OR11G2Q8NGC1 345 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ASB5Q8WWX0 329 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 NAT6Q93015 286 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 PIGTQ969N2 578 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF285Q96NJ3 590 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 UCN2Q96RP3 112 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 C1QTNF6Q9BXI9 259 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 UCK1Q9HA47 277 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 CA10Q9NS85 328 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 HRH3Q9Y5N1 445 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 WIF1Q9Y5W5 379 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 MRPS18BQ9Y676 258 aaKnown RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 CIB4A0PJX0 185 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ANKUB1A6NFN9 424 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF254O75437 659 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GLSO94925 669 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 TNK1Q13470 666 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 C3orf33Q6P1S2 294 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 WDR74Q6RFH5 385 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 PLXDC2Q6UX71 529 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 RPS19BP1Q86WX3 136 aaKnown RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 FAM71CQ8NEG0 241 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 SPACA9Q96E40 222 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ZC3HAV1LQ96H79 300 aaKnown RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 MNTQ99583 582 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 PRRG4Q9BZD6 226 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GHITMQ9H3K2 345 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GPR84Q9NQS5 396 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GPR27Q9NS67 375 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 SCP2D1Q9UJQ7 156 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GDF2Q9UK05 429 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-213ENST00000454468 NBASA2RRP1 2371 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ZNF878C9JN71 531 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 PMP2P02689 132 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 SERPINA2P20848 420 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 BDKRB2P30411 391 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 OR3A2P47893 321 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 CSNK1A1P48729 337 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 GABREP78334 506 aa10.69□□□□□ -0.7
SMPD4-213ENST00000454468 MOGAT2Q3SYC2 334 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms