RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 SLC25A19Q9HC21 320 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 HINT3Q9NQE9 182 aaKnown RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 KRT84Q9NSB2 600 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 MRPL22Q9NWU5 206 aaKnown RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 CGGBP1Q9UFW8 167 aaPredicted RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 TVP23AA6NH52 213 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 PRR23D1E9PI22 279 aaPredicted RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 CLPTM1O96005 669 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 IGHV3-13P01766 116 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 SPARCP09486 303 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 PRR23D2P0DMB1 279 aaPredicted RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 DAOP14920 347 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 ENTPD1P49961 510 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 ESRRGP62508 458 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 PCGF3Q3KNV8 242 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 CFAP77Q6ZQR2 320 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 ZCCHC24Q8N2G6 241 aaKnown RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 OR5L1Q8NGL2 311 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 KLF14Q8TD94 323 aaPredicted RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 C10orf105Q8TEF2 133 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 LRTOMTQ8WZ04 291 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 SLC7A6Q92536 515 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 APOBEC3DQ96AK3 386 aaPredicted RBP13.28□□□□□ -0.28
VPS8-213ENST00000453056 ATF6BQ99941 703 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 CYSLTR2Q9NS75 346 aa13.28□□□□□ -0.28
VPS8-213ENST00000453056 FAM183AA6NL82 134 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 SURF4O15260 269 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 TIMM8AO60220 97 aaPredicted RBP13.27□□□□□ -0.29
VPS8-213ENST00000453056 NGFP01138 241 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 NAT2P11245 290 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 IGFBP5P24593 272 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 LIPAP38571 399 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 DAPP51397 102 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 CRISP1P54107 249 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 CDK5Q00535 292 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 DBPQ10586 325 aaPredicted RBP13.27□□□□□ -0.29
VPS8-213ENST00000453056 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 ACSM5Q6NUN0 579 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 UBASH3BQ8TF42 649 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 SPTSSAQ969W0 71 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 INTS14Q96SY0 518 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 OSBPL10Q9BXB5 764 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 MED20Q9H944 212 aa13.27□□□□□ -0.29
VPS8-213ENST00000453056 C17orf100A8MU93 164 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 PRODHO43272 600 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 GLCEO94923 617 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 DBHP09172 617 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 CLUP10909 449 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 GSTT1P30711 240 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 MPV17P39210 176 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 TAF13Q15543 124 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 SNAPC1Q16533 368 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 TEX30Q5JUR7 227 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 PLBD1Q6P4A8 553 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 LYPD4Q6UWN0 246 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 COPS4Q9BT78 406 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 OR51V1Q9H2C8 321 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 SEMA6AQ9H2E6 1030 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 WDR76Q9H967 626 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
VPS8-213ENST00000453056 F5H5K5 113 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 ZNF593O00488 134 aaPredicted RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 TPD52L2O43399 206 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 HEXAP06865 529 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 ZNF81P51508 661 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 TPTEP56180 551 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 RPS7P62081 194 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 MRPS11P82912 194 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 PCK2Q16822 640 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 KLHL12Q53G59 568 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 FAM209AQ5JX71 171 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 KDM4DQ6B0I6 523 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 SHFQ7M4L6 423 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 DCXRQ7Z4W1 244 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 ERI1Q8IV48 349 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 ZNF786Q8N393 782 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 OR6N2Q8NGY6 317 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 MAP6Q96JE9 813 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 RBM4BQ9BQ04 359 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 GSX1Q9H4S2 264 aaPredicted RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 DECR2Q9NUI1 292 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 DDX28Q9NUL7 540 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 TVP23BQ9NYZ1 205 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
VPS8-213ENST00000453056 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
VPS8-213ENST00000453056 SAC3D1A6NKF1 404 aa13.24□□□□□ -0.29
VPS8-213ENST00000453056 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
VPS8-213ENST00000453056 M0R135 149 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms