RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 B9D1Q9UPM9 204 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 POLR1DQ9Y2S0 133 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 LYVE1Q9Y5Y7 322 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 OR6C68A6NDL8 312 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 TCF21O43680 179 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 PLPP2O43688 288 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 AVPP01185 164 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 RAC2P15153 192 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 RBMXP38159 391 aaKnown RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 IFNGR2P38484 337 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 MAGEA2P43356 314 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 RGS6P49758 472 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 HMGA2P52926 109 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 KRTAP27-1Q3LI81 207 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 CORO6Q6QEF8 472 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 JAZF1Q86VZ6 243 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 FITM2Q8N6M3 262 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 ZNF283Q8N7M2 679 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 SDR9C7Q8NEX9 313 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 OR2Z1Q8NG97 314 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 PTP4A1Q93096 173 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 DCLRE1CQ96SD1 692 aaKnown RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 GAL3ST1Q99999 423 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 BTBD10Q9BSF8 475 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 IFT27Q9BW83 186 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 METTL17Q9H7H0 456 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 SRA1Q9HD15 236 aaKnown RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 RPRD1BQ9NQG5 326 aaKnown RBP10.54□□□□□ -0.72
CPSF4-208ENST00000452047 ACTR3BQ9P1U1 418 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 TMCC3Q9ULS5 477 aa10.54□□□□□ -0.72
CPSF4-208ENST00000452047 TCRBV5S2A0A599 114 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 BHLHE40O14503 412 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 IDH3BO43837 385 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 KRT36O76013 467 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 RENP00797 406 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 IGHV2-70P01814 119 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 NOS3P29474 1203 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 GGT2P36268 569 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 CENPAP49450 140 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 MXRA7P84157 204 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 HLXQ14774 488 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 ZNF770Q6IQ21 691 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 SLC18B1Q6NT16 456 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 FAHD2BQ6P2I3 314 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 CYP2R1Q6VVX0 501 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 CFAP77Q6ZQR2 320 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 COLCA1Q6ZS62 124 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 ZNF771Q7L3S4 317 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 OR9Q2Q8NGE9 314 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 OR4C15Q8NGM1 316 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 GNPDA2Q8TDQ7 276 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 APOBEC3DQ96AK3 386 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 FAHD2AQ96GK7 314 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 SIGLEC11Q96RL6 698 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 FN3KQ9H479 309 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 PNRC2Q9NPJ4 139 aaKnown RBP10.53□□□□□ -0.72
CPSF4-208ENST00000452047 TMEM106BQ9NUM4 274 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 PTTG3PQ9NZH4 202 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 IL19Q9UHD0 177 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 NPTNQ9Y639 398 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 CDH10Q9Y6N8 788 aa10.53□□□□□ -0.72
CPSF4-208ENST00000452047 LOC105371242A0A075B767 164 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 A0A0X1KG70 313 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 ISPDA4D126 451 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 TNFSF4P23510 183 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 MNAT1P51948 309 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 CLEC12AQ5QGZ9 265 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 SLC35F1Q5T1Q4 408 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 LCN8Q6JVE9 175 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 SHQ1Q6PI26 577 aaKnown RBP10.52□□□□□ -0.73
CPSF4-208ENST00000452047 PEG10Q86TG7 708 aaKnown RBP10.52□□□□□ -0.73
CPSF4-208ENST00000452047 LINC00346Q8IVM7 164 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR5AS1Q8N127 324 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 SEMA6DQ8NFY4 1073 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR52E2Q8NGJ4 325 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR5L1Q8NGL2 311 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR8D4Q8NGM9 314 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 ITLN1Q8WWA0 313 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 OR2V2Q96R30 315 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 CCT8L2Q96SF2 557 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 DDOQ99489 341 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 PLA2G12AQ9BZM1 189 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 TRIM15Q9C019 465 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 MRPL22Q9NWU5 206 aaKnown RBP10.52□□□□□ -0.73
CPSF4-208ENST00000452047 IL20Q9NYY1 176 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 UBAP1Q9NZ09 502 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 CYB5R1Q9UHQ9 305 aa10.52□□□□□ -0.73
CPSF4-208ENST00000452047 A0A0A6YYJ9 748 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms