RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NDOR1Q9UHB4 597 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CCNL1Q9UK58 526 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TTC28Q96AY4 2481 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ADAMTS7Q9UKP4 1686 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PPV4 95 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 TLCD2A6NGC4 264 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CD300LBA8K4G0 201 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF850A8MQ14 1090 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 NDUFS4O43181 175 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 IRAK2O43187 625 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SOCS5O75159 536 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 FGF19O95750 216 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 IGHA2P01877 340 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 WNT1P04628 370 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 PCCBP05166 539 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CD14P08571 375 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 MRPL3P09001 348 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 HOXC4P09017 264 aaPredicted RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 H2BFMP0C1H6 154 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SLC35G4P0C7Q5 338 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 TXNP10599 105 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 COX5BP10606 129 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 HOXB9P17482 250 aaPredicted RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 ACRV1P26436 265 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 KIR3DL2P43630 455 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 GLIPR1P48060 266 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 NPBWR1P48145 328 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 UBE2NP61088 152 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF85Q03923 595 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 DUSP8Q13202 625 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SLBPQ14493 270 aaKnown RBP eCLIP2.01□□□□□ -2.09
USP53-202ENST00000450251 CNN3Q15417 329 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 FBLN7Q53RD9 439 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 EMC4Q5J8M3 183 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 C6orf132Q5T0Z8 1188 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 C9orf131Q5VYM1 1079 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF776Q68DI1 518 aaPredicted RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 RGMBQ6NW40 437 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 LANCL3Q6ZV70 420 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 GLCCI1Q86VQ1 547 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 LSRQ86X29 649 aaPredicted RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 MTMR14Q8NCE2 650 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CPEB3Q8NE35 698 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 OR4N2Q8NGD1 307 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 OR51A4Q8NGJ6 313 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 OR5D14Q8NGL3 314 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 OR13C9Q8NGT0 318 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 OR6N2Q8NGY6 317 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ASB5Q8WWX0 329 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 RAB37Q96AX2 223 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 WDR34Q96EX3 536 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 IGSF21Q96ID5 467 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 MS4A4EQ96PG1 132 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 FAAP24Q9BTP7 215 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 HCAR1Q9BXC0 346 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 REG4Q9BYZ8 158 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SRD5A3Q9H8P0 318 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 TMEM242Q9NWH2 141 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 DNMT3BQ9UBC3 853 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 GIMAP2Q9UG22 337 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 HSPB8Q9UJY1 196 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 UTS2RQ9UKP6 389 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 HHLA2Q9UM44 414 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 YARS2Q9Y2Z4 477 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF337Q9Y3M9 751 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CDK5RAP2Q96SN8 1893 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 NSG1A0A0A6YYJ2 146 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF891A8MT65 544 aaPredicted RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 CEBPZOSA8MTT3 80 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 F5H5K5 113 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 H3BRB1 525 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 FXYD1O00168 92 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 PDE6DO43924 150 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 PRAMEF11O60813 436 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CTNSO60931 367 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ZFPL1O95159 310 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CDS2O95674 445 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 C1SP09871 688 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 DPP4P27487 766 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 GCH1P30793 250 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ADRA1AP35348 466 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 TDGF1P3P51864 188 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 NRLP54845 237 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 WNT3P56703 355 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SELENOTP62341 195 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 LCN2P80188 198 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 CTBSQ01459 385 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 ZNF92Q03936 586 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 SMAD4Q13485 552 aaKnown RBP2.01□□□□□ -2.09
USP53-202ENST00000450251 GAMTQ14353 236 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 HERPUD1Q15011 391 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 EXT1Q16394 746 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 MPV17LQ2QL34 196 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 MESTQ5EB52 335 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 PSAPL1Q6NUJ1 521 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 DEGS2Q6QHC5 323 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 BPIFA4PQ86YQ2 179 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 UMODL1-AS1Q8N2C9 162 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 DMBX1Q8NFW5 382 aa2.01□□□□□ -2.09
USP53-202ENST00000450251 OR2M7Q8NG81 312 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms