RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF836Q6ZNA1 936 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF627Q7L945 461 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF461Q8TAF7 563 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 MRGPRFQ96AM1 343 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 FAM3DQ96BQ1 224 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 Q96M85 177 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 JSRP1Q96MG2 331 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 PRAP1Q96NZ9 151 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 SLC2A4RGQ9NR83 387 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 SLC17A5Q9NRA2 495 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF107Q9UII5 783 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF443Q9Y2A4 671 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 HS3ST3B1Q9Y662 390 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ANAPC1Q9H1A4 1944 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 TRBV5-5A0A0J9YX44 114 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 EFSO43281 561 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF354AO60765 605 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 RAMP1O60894 148 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 DNAJB6O75190 326 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 STK17BO94768 372 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 C1orf105O95561 183 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 GRPRP30550 384 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 TSFMP43897 325 aaKnown RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 SPINT3P49223 89 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ARRB1P49407 418 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 PDX1P52945 283 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 RASGEF1BQ0VAM2 473 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 SMAD4Q13485 552 aaKnown RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 C2orf76Q3KRA6 126 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 CST9Q5W186 159 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 SLC22A25Q6T423 547 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 DCXRQ7Z4W1 244 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF584Q8IVC4 421 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ADAD2Q8NCV1 583 aaKnown RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 OR4S1Q8NGB4 309 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 OR56A1Q8NGH5 318 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 OR4K13Q8NH42 304 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 SFXN5Q8TD22 340 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 RNASEH2CQ8TDP1 164 aaKnown RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 NPRL2Q8WTW4 380 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 RNF166Q96A37 237 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 DTD2Q96FN9 168 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 GNRHR2Q96P88 292 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 ZNF385AQ96PM9 386 aaKnown RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 CCNL2Q96S94 520 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 TCEAL2Q9H3H9 227 aaPredicted RBP7.76□□□□□ -1.17
LSM5-208ENST00000450169 SPHK2Q9NRA0 654 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 IL36AQ9UHA7 158 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 IL17BQ9UHF5 180 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 URGCP-MRPS24S4R325 110 aa7.76□□□□□ -1.17
LSM5-208ENST00000450169 TGIF2-C20orf24A0A0A6YYL0 155 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 RAB27BO00194 218 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ZNF432O94892 652 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 AIFM1O95831 613 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 PET100P0DJ07 73 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 SLC6A6P31641 620 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 GJA4P35212 333 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 GNALP38405 381 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 KIR3DL2P43630 455 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 RABIFP47224 123 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 LSSP48449 732 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ZNF136P52737 540 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ERVFRD-1P60508 538 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 RAB11BQ15907 218 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 TMEM35AQ53FP2 167 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 SOHLH1Q5JUK2 328 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 TMEM31Q5JXX7 168 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 C9orf64Q5T6V5 341 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 OR4C11Q6IEV9 310 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 SLC39A5Q6ZMH5 540 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 TMCO2Q7Z6W1 182 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 OR51F2Q8NH61 342 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 TMEM106AQ96A25 262 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 MRGPRX3Q96LB0 322 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 OR2M4Q96R27 311 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 PBDC1Q9BVG4 233 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 MS4A8Q9BY19 250 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 NELFAQ9H3P2 528 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 PDE7BQ9NP56 450 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 FAM212BQ9NTI7 297 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 KLK13Q9UKR3 277 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 FBXO7Q9Y3I1 522 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 OR51B4Q9Y5P0 310 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 MTCH2Q9Y6C9 303 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 DENND4CQ5VZ89 1909 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 TRIP12Q14669 1992 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 GLOD5A6NK44 160 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ZNF705GA8MUZ8 300 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 PRR32B1ATL7 298 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 LEFTY2O00292 366 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ERAL1O75616 437 aaKnown RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 STC2O76061 302 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 GJB5O95377 273 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 CD37P11049 281 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms