RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 E9PI62 339 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 C16orf97H3BN30 126 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 SYNGR3O43761 229 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 AGFG2O95081 481 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 PRKXP51817 358 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 GBX2P52951 348 aaPredicted RBP12.75□□□□□ -0.37
TNF-208ENST00000449264 GP2P55259 537 aaKnown RBP12.75□□□□□ -0.37
TNF-208ENST00000449264 GRB2P62993 217 aaKnown RBP12.75□□□□□ -0.37
TNF-208ENST00000449264 RAB39AQ14964 217 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 CCDC36Q8IYA8 594 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 ALDH16A1Q8IZ83 802 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 STEAP2Q8NFT2 490 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 OR1F12Q8NHA8 337 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 LILRB4Q8NHJ6 448 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 HSD17B8Q92506 261 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 OPALINQ96PE5 141 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 MGLLQ99685 303 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 C1QTNF6Q9BXI9 259 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 DDX28Q9NUL7 540 aaKnown RBP12.75□□□□□ -0.37
TNF-208ENST00000449264 BABAM2Q9NXR7 383 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 B3GNT2Q9NY97 397 aa12.75□□□□□ -0.37
TNF-208ENST00000449264 ADGRG4Q8IZF6 3080 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 OR6C6A6NF89 314 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 F5H5K5 113 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 ZNF254O75437 659 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 DBHP09172 617 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
TNF-208ENST00000449264 APEX1P27695 318 aaKnown RBP12.74□□□□□ -0.37
TNF-208ENST00000449264 SLC6A9P48067 706 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 IDH3GP51553 393 aaPredicted RBP12.74□□□□□ -0.37
TNF-208ENST00000449264 PLP2Q04941 152 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 BLMHQ13867 455 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 TSTQ16762 297 aaKnown RBP12.74□□□□□ -0.37
TNF-208ENST00000449264 ARMCX4Q5H9R4 360 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 DEGS2Q6QHC5 323 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 KCTD20Q7Z5Y7 419 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 ZNF283Q8N7M2 679 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 CPEB3Q8NE35 698 aaKnown RBP12.74□□□□□ -0.37
TNF-208ENST00000449264 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 COQ7Q99807 217 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 KCNJ16Q9NPI9 418 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 N6AMT1Q9Y5N5 214 aa12.74□□□□□ -0.37
TNF-208ENST00000449264 IQCMA0A1B0GVH7 501 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 CELA3BP08861 270 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 SLC2A1P11166 492 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 CCL2P13500 99 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 JUNBP17275 347 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 CCNOP22674 350 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 CX3CR1P49238 355 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 MFGE8Q08431 387 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 TAB1Q15750 504 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ZNF829Q3KNS6 432 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 SYT6Q5T7P8 510 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ZNF584Q8IVC4 421 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 SPTSSAQ969W0 71 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 BOD1Q96IK1 185 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 COG8Q96MW5 612 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 KCNJ15Q99712 375 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 USP9XQ93008 2570 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 M0R135 149 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 CELP19835 753 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 STOMP27105 288 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 TAS2R43P59537 309 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 ECH1Q13011 328 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 PPA1Q15181 289 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ARL9Q6T311 187 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 RHOUQ7L0Q8 258 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 SATL1Q86VE3 508 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 UFD1Q92890 307 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 RNASE6Q93091 150 aaKnown RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 MUCL1Q96DR8 90 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 LRRC46Q96FV0 321 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ZNF799Q96GE5 643 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 ZC3HAV1LQ96H79 300 aaKnown RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 DOK1Q99704 481 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 SLC25A15Q9Y619 301 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 SIRT4Q9Y6E7 314 aaPredicted RBP12.73□□□□□ -0.37
TNF-208ENST00000449264 R4GMQ9 66 aa12.73□□□□□ -0.37
TNF-208ENST00000449264 UBR5O95071 2799 aaPredicted RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 TMEM269A0A1B0GVZ9 245 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 C5orf49A4QMS7 147 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 PNPP00491 289 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 ANXA2P07355 339 aaKnown RBP12.72□□□□□ -0.37
TNF-208ENST00000449264 CRYGSP22914 178 aa12.72□□□□□ -0.37
TNF-208ENST00000449264 GRNP28799 593 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms