RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 MEP1BQ16820 701 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 ZMAT1Q5H9K5 638 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 ELFN2Q5R3F8 820 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 SLX4IPQ5VYV7 408 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 PLBD1Q6P4A8 553 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-204ENST00000447376 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
SF3A1-204ENST00000447376 OR5L1Q8NGL2 311 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 PITX2Q99697 317 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 OR51V1Q9H2C8 321 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 TPK1Q9H3S4 243 aa14.06□□□□□ -0.16
SF3A1-204ENST00000447376 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-204ENST00000447376 FAM183AA6NL82 134 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 J3QW42 95 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 RER1O15258 196 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 TPD52L2O43399 206 aaKnown RBP14.05□□□□□ -0.16
SF3A1-204ENST00000447376 ICMTO60725 284 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 GLCEO94923 617 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 GPANK1O95872 356 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 TFP02787 698 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 GYPBP06028 91 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 DAOP14920 347 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 LIPAP38571 399 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 ALDH3B1P43353 468 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 CDC42P60953 191 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 TRIP10Q15642 601 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 PCGF3Q3KNV8 242 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 KLHL12Q53G59 568 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 SPATA46Q5T0L3 261 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 LRP11Q86VZ4 500 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 CPOQ8IVL8 374 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 ZNF101Q8IZC7 436 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 OR51L1Q8NGJ5 315 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 COQ7Q99807 217 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 OR2J1Q9GZK6 312 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 MED20Q9H944 212 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 HINT3Q9NQE9 182 aaKnown RBP14.05□□□□□ -0.16
SF3A1-204ENST00000447376 CYSLTR2Q9NS75 346 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 TBCCD1Q9NVR7 557 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 CGGBP1Q9UFW8 167 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-204ENST00000447376 LHFPL6Q9Y693 200 aa14.05□□□□□ -0.16
SF3A1-204ENST00000447376 IGLV3-9A0A075B6K5 115 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 LY6HO94772 140 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 CLPTM1O96005 669 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 IGHV3-13P01766 116 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 EPHA2P29317 976 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 GSTT1P30711 240 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 WNT5AP41221 380 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 RPS7P62081 194 aaKnown RBP14.04□□□□□ -0.16
SF3A1-204ENST00000447376 MAD2L1BPQ15013 274 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-204ENST00000447376 ALKBH6Q3KRA9 238 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 SLC35D3Q5M8T2 416 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 MBNL2Q5VZF2 373 aaKnown RBP14.04□□□□□ -0.16
SF3A1-204ENST00000447376 C12orf73Q69YU5 71 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 DNM1P46Q6ZS02 220 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 RFPL4BQ6ZWI9 263 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 LINC00346Q8IVM7 164 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 CIARTQ8N365 385 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-204ENST00000447376 SLC25A40Q8TBP6 338 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 C10orf105Q8TEF2 133 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 UBASH3BQ8TF42 649 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 PTP4A1Q93096 173 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 ATF6BQ99941 703 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 IMPAD1Q9NX62 359 aa14.04□□□□□ -0.16
SF3A1-204ENST00000447376 IGHV4-30-2A0A087WSY4 118 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 TLX2O43763 284 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 TIMM8AO60220 97 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 HEXAP06865 529 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 CLUP10909 449 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 ENTPD1P49961 510 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 MSMPQ1L6U9 139 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 CCDC92Q53HC0 331 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 LCN1P1Q5VSP4 162 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 OTPQ5XKR4 325 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 CORO6Q6QEF8 472 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 ZCCHC24Q8N2G6 241 aaKnown RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 PACRGLQ8N7B6 248 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 TCEANCQ8N8B7 351 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 TMEM163Q8TC26 289 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 KLF14Q8TD94 323 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 SPTSSAQ969W0 71 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 APOBEC3DQ96AK3 386 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 MARS2Q96GW9 593 aaKnown RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 RDH12Q96NR8 316 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 INTS14Q96SY0 518 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 DECR2Q9NUI1 292 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 MRPL22Q9NWU5 206 aaKnown RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 MYEF2Q9P2K5 600 aaKnown RBP14.03□□□□□ -0.16
SF3A1-204ENST00000447376 CYB5R1Q9UHQ9 305 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
SF3A1-204ENST00000447376 C17orf100A8MU93 164 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 ZNF593O00488 134 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-204ENST00000447376 PRKYO43930 277 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 NGFP01138 241 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 SPARCP09486 303 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 NAT2P11245 290 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 GGT2P36268 569 aa14.02□□□□□ -0.17
SF3A1-204ENST00000447376 POLR2IP36954 125 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms