RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
SDCBP-204ENST00000447182 PDE7BQ9NP56 450 aa17.08■□□□□ 0.32
SDCBP-204ENST00000447182 PCNX3Q9H6A9 2034 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 IGHV5-51A0A0C4DH38 117 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 EIF1AYO14602 144 aaKnown RBP17.07■□□□□ 0.32
SDCBP-204ENST00000447182 CCSO14618 274 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 MPZL1O95297 269 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 EIF1AXP47813 144 aaKnown RBP17.07■□□□□ 0.32
SDCBP-204ENST00000447182 CDNFQ49AH0 187 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 CD163Q86VB7 1156 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 ACBD4Q8NC06 268 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 ST7LQ8TDW4 575 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 PMEPA1Q969W9 287 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 SEC22AQ96IW7 307 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 FAM117AQ9C073 453 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 PCDHB16Q9NRJ7 776 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 MYEF2Q9P2K5 600 aaKnown RBP17.07■□□□□ 0.32
SDCBP-204ENST00000447182 MMP17Q9ULZ9 603 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 PLEKHA6Q9Y2H5 1048 aa17.07■□□□□ 0.32
SDCBP-204ENST00000447182 RAB19A4D1S5 217 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 CDC14CA4D256 554 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 SULT2B1O00204 365 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 OR2T1O43869 369 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 AHSA1O95433 338 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 IGLV3-19P01714 112 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 CASRP41180 1078 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 NR0B1P51843 470 aaKnown RBP17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PNLIPRP2P54317 469 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 DEFA5Q01523 94 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PLCXD2Q0VAA5 305 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 NKPD1Q17RQ9 610 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 LRRC37A5PQ49AS3 106 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PRAMEF17Q5VTA0 474 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 HLA-DQA1Q5Y7H0 255 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 ZNF813Q6ZN06 617 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 TRAPPC6BQ86SZ2 158 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 OR10Z1Q8NGY1 313 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 GPR119Q8TDV5 335 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 NPAS1Q99742 590 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 NKX6-2Q9C056 277 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-204ENST00000447182 XIRP2A4UGR9 3374 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 TLCD2A6NGC4 264 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 A6NIZ1 184 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 CSN2P05814 226 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 ZNF823P16415 610 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 MAOBP27338 520 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 HSD11B1P28845 292 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PRKXP51817 358 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 RAP1BP61224 184 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 RAP1AP62834 184 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 IL13RA1P78552 427 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 INPP5JQ15735 1006 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PABPC1L2AQ5JQF8 200 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PDSS1Q5T2R2 415 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 DCXRQ7Z4W1 244 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 C7orf61Q8IZ16 206 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 PAQR4Q8N4S7 273 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-204ENST00000447182 TMEM185AQ8NFB2 350 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 THAP6Q8TBB0 222 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 MARC2Q969Z3 335 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 FAM46BQ96A09 425 aa17.06■□□□□ 0.32
SDCBP-204ENST00000447182 TMEM269A0A1B0GVZ9 245 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 FTCDNL1E5RQL4 147 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 TDGQ13569 410 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 DNM1P34Q6PK57 102 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 KLHDC7BQ96G42 594 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-204ENST00000447182 CNTD2Q9H8S5 307 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 CUTCQ9NTM9 273 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 EPOPA6NHQ4 379 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 FAM74A7A6NL05 159 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 SMAD9O15198 467 aaKnown RBP17.05■□□□□ 0.32
SDCBP-204ENST00000447182 LMX1BO60663 402 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 SCGNO76038 276 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 STK17BO94768 372 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 BPNT1O95861 308 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
SDCBP-204ENST00000447182 TBPP20226 339 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 BDKRB2P30411 391 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 MMP16P51512 607 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 GFERP55789 205 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 QRFPP83859 136 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 ZP2Q05996 745 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 FAM74A3Q4VXF1 159 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 BEX5Q5H9J7 111 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 DTWD2Q8NBA8 298 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 INO80EQ8NBZ0 244 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-204ENST00000447182 OR6S1Q8NH40 331 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 TGM7Q96PF1 710 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 NUDT16L1Q9BRJ7 211 aaKnown RBP17.05■□□□□ 0.32
SDCBP-204ENST00000447182 OR11A1Q9GZK7 315 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 WWTR1Q9GZV5 400 aa17.05■□□□□ 0.32
SDCBP-204ENST00000447182 FADS1O60427 444 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 LIPCP11150 499 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 ABCD3P28288 659 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 OR1D4P47884 311 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 GSK3AP49840 483 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 ZP4Q12836 540 aa17.04■□□□□ 0.32
SDCBP-204ENST00000447182 UNC119Q13432 240 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms