RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 KCNMB1Q16558 191 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 CORO6Q6QEF8 472 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 SPICQ8N5J4 248 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 OR10AD1Q8NGE0 317 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 C22orf15Q8WYQ4 148 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 PTP4A1Q93096 173 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 ERMAPQ96PL5 475 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-205ENST00000447041 FAM107BQ9H098 131 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 MMP26Q9NRE1 261 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 ATPIF1Q9UII2 106 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 PPP1R3CQ9UQK1 317 aa15.33■□□□□ 0.04
COL9A1-205ENST00000447041 IGLV1-36A0A0B4J1U3 117 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 TRIM77I1YAP6 450 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 RAC2P15153 192 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 RGS6P49758 472 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 MMP16P51512 607 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 TMEM155Q4W5P6 130 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 OR2T2Q6IF00 324 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 LEG1Q6P5S2 330 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 DNM1P34Q6PK57 102 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 BPIFB2Q8N4F0 458 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 KLHL36Q8N4N3 616 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 DEFB108BQ8NET1 73 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 FAM216AQ8WUB2 273 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 NMNAT3Q96T66 252 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 SUCNR1Q9BXA5 334 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 OR52D1Q9H346 318 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 GORASP2Q9H8Y8 452 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 PATZ1Q9HBE1 687 aaKnown RBP15.32■□□□□ 0.04
COL9A1-205ENST00000447041 ESM1Q9NQ30 184 aa15.32■□□□□ 0.04
COL9A1-205ENST00000447041 J3QW42 95 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 GMNNO75496 209 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 GADD45GO95257 159 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 CRABP1P29762 137 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 HIST1H3AP68431 136 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 RFX4Q33E94 735 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 HIST2H3PS2Q5TEC6 136 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 FBXW12Q6X9E4 464 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 HIST2H3AQ71DI3 136 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 JAZF1Q86VZ6 243 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-205ENST00000447041 OR6V1Q8N148 313 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 ATG16L2Q8NAA4 619 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 GJC3Q8NFK1 279 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF420Q8TAQ5 688 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-205ENST00000447041 APOBEC3DQ96AK3 386 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-205ENST00000447041 PYURFQ96I23 114 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 JMJD8Q96S16 334 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 COQ7Q99807 217 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 HDHD2Q9H0R4 259 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 FN3KQ9H479 309 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 WDR76Q9H967 626 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 SRA1Q9HD15 236 aaKnown RBP15.31■□□□□ 0.04
COL9A1-205ENST00000447041 GCM1Q9NP62 436 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 B9D1Q9UPM9 204 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 WNK2Q9Y3S1 2297 aa15.31■□□□□ 0.04
COL9A1-205ENST00000447041 PPIAL4EA0A075B759 164 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 PPIAL4CA0A0B4J2A2 164 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 F5H0A9 414 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 PPIAL4DF5H284 164 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 H0YL77 283 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 TRAPPC2LH3BP13 241 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 TMEM178BH3BS89 294 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 SURF4O15260 269 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 MLNRO43193 412 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 PPIAL4FP0DN26 164 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 HIST1H1CP16403 213 aaKnown RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 SLC6A6P31641 620 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 MSX2P35548 267 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 PRSS12P56730 875 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 COX10Q12887 443 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 PGM2L1Q6PCE3 622 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 CFAP77Q6ZQR2 320 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 LINC00346Q8IVM7 164 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 ZDHHC22Q8N966 263 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 BHLHE23Q8NDY6 225 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 SLC26A10Q8NG04 563 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 OR8G5Q8NG78 346 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 OR4K13Q8NH42 304 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 DVL3Q92997 716 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 MEGF10Q96KG7 1140 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 RBM4Q9BWF3 364 aaKnown RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 RPRD1BQ9NQG5 326 aaKnown RBP15.3■□□□□ 0.04
COL9A1-205ENST00000447041 MAGEL2Q9UJ55 1249 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 TENM1Q9UKZ4 2725 aa15.3■□□□□ 0.04
COL9A1-205ENST00000447041 IGHV3-64DA0A0J9YX35 117 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 TMEM89A2RUT3 159 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 CEACAM18A8MTB9 384 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 A8MXK9 166 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 OR10H3O60404 316 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 SNX3O60493 162 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF205O95201 554 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 CYB5R3P00387 301 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-205ENST00000447041 HSD17B1P14061 328 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 FPR3P25089 353 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 RRM2P31350 389 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 MDH2P40926 338 aaKnown RBP15.29■□□□□ 0.04
COL9A1-205ENST00000447041 SLC6A9P48067 706 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 COMPP49747 757 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-205ENST00000447041 RSPO1Q2MKA7 263 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms