RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 IGHV1-69-2A0A0G2JMI3 117 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 H3BSA7 217 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 GNGT2O14610 69 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 TIMM8AO60220 97 aaPredicted RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 DNAJC8O75937 253 aaPredicted RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 GSTM3P21266 225 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 RPS27P42677 84 aaKnown RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 CRYBB2P43320 205 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 HLXQ14774 488 aaPredicted RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 CHRFAM7AQ494W8 412 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 SLC36A3Q495N2 470 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 SPRNQ5BIV9 151 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 SLC18B1Q6NT16 456 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 USP51Q70EK9 711 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 PROKR2Q8NFJ6 384 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 OR9Q1Q8NGQ5 310 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 OR2AJ1Q8NGZ0 328 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 CLDND2Q8NHS1 167 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 PITX2Q99697 317 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 COQ7Q99807 217 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 SAP30LQ9HAJ7 183 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 TREM2Q9NZC2 230 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
USE1-202ENST00000445667 KCNS2Q9ULS6 477 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 POMPQ9Y244 141 aa12.55□□□□□ -0.4
USE1-202ENST00000445667 GSC2O15499 205 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 GYPBP06028 91 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 ZNF823P16415 610 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 IGFBP5P24593 272 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 GGT2P36268 569 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 LIPAP38571 399 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 MVKQ03426 396 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 BNIP1Q12981 228 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
USE1-202ENST00000445667 CRMP1Q14194 572 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 FAM209AQ5JX71 171 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 IL17RELQ6ZVW7 336 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 HS3ST5Q8IZT8 346 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 OR2T33Q8NG76 320 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 OR2T4Q8NH00 348 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 HPS1Q92902 700 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 PTP4A1Q93096 173 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 HAVCR1Q96D42 359 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 DCLRE1CQ96SD1 692 aaKnown RBP12.54□□□□□ -0.4
USE1-202ENST00000445667 BEX2Q9BXY8 128 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 HDHD2Q9H0R4 259 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 CYSLTR2Q9NS75 346 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 PTTG3PQ9NZH4 202 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 PDP1Q9P0J1 537 aaPredicted RBP12.54□□□□□ -0.4
USE1-202ENST00000445667 CYB5R1Q9UHQ9 305 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
USE1-202ENST00000445667 SONP18583 2426 aaKnown RBP12.54□□□□□ -0.4
USE1-202ENST00000445667 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 TCRBV3S1A0A5B6 114 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 F5H5K5 113 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 CLUP10909 449 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 PSKH1P11801 424 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 PRKACGP22612 351 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 TUBG1P23258 451 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 RBMXP38159 391 aaKnown RBP12.53□□□□□ -0.4
USE1-202ENST00000445667 RGS6P49758 472 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 CBX1P83916 185 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 CD300LDQ6UXZ3 194 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 Q6ZR03 302 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 NAA40Q86UY6 237 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 LINC01356Q8N9X3 169 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 CCL17Q92583 94 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 MAP6Q96JE9 813 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 RBM4Q9BWF3 364 aaKnown RBP12.53□□□□□ -0.4
USE1-202ENST00000445667 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 WDR76Q9H967 626 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 PNRC2Q9NPJ4 139 aaKnown RBP12.53□□□□□ -0.4
USE1-202ENST00000445667 TUBG2Q9NRH3 451 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 TMEM160Q9NX00 188 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 CDC42EP3Q9UKI2 254 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 ZDHHC8Q9ULC8 765 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 BAIAP2Q9UQB8 552 aa12.53□□□□□ -0.4
USE1-202ENST00000445667 H3BN98 237 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 FKBP6O75344 327 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 E2F6O75461 281 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 ADH4P08319 380 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 KITLGP21583 273 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 POU1F1P28069 291 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 CDK5R2Q13319 367 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 GK3PQ14409 553 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 HFEQ30201 348 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 OR2T2Q6IF00 324 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 ZNF511Q8NB15 262 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 OR5L1Q8NGL2 311 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 TEX47Q8TBZ9 253 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
USE1-202ENST00000445667 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms