RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 SLC24A4Q8NFF2 622 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ZDHHC5Q9C0B5 715 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF385DQ9H6B1 395 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 LYRM2Q9NU23 88 aaPredicted RBP16.99■□□□□ 0.31
SHANK3-203ENST00000445220 NID1P14543 1247 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 CXCL12P48061 93 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 SHHQ15465 462 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 TOMM34Q15785 309 aaPredicted RBP16.99■□□□□ 0.31
SHANK3-203ENST00000445220 SLC25A35Q3KQZ1 300 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ARHGAP11BQ3KRB8 267 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 RBMXL3Q8N7X1 1067 aaKnown RBP16.99■□□□□ 0.31
SHANK3-203ENST00000445220 STACQ99469 402 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 MAP3K3Q99759 626 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ZDHHC11Q9H8X9 412 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 PRAMEF4O60810 478 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 MT-ATP6P00846 226 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 RRASP10301 218 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 GUK1Q16774 197 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HSF5Q4G112 596 aaPredicted RBP16.99■□□□□ 0.31
SHANK3-203ENST00000445220 MARCH1Q8TCQ1 289 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HHIPQ96QV1 700 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HSPB2A8KAH6 182 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HSD17B6O14756 317 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HRO43593 1189 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 NDUFB6O95139 128 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 B3GALT4O96024 378 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 GRB2P62993 217 aaKnown RBP16.99■□□□□ 0.31
SHANK3-203ENST00000445220 HSPB2Q16082 182 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 CATSPERDQ86XM0 798 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 LHFPL5Q8TAF8 219 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 ARL2-SNX15V9GYD0 113 aa16.99■□□□□ 0.31
SHANK3-203ENST00000445220 GLAP06280 429 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 OR8U8P0C7N1 319 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 HIST1H1CP16403 213 aaKnown RBP16.98■□□□□ 0.31
SHANK3-203ENST00000445220 CLDN17P56750 224 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF750Q32MQ0 723 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 SPICQ8N5J4 248 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 STT3BQ8TCJ2 826 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 ACTR3CQ9C0K3 210 aaPredicted RBP16.98■□□□□ 0.31
SHANK3-203ENST00000445220 OR51B6Q9H340 312 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 GNG12Q9UBI6 72 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 S100A7P31151 101 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 KRTDAPP60985 99 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 DOK3Q7L591 496 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 KDF1Q8NAX2 398 aaPredicted RBP16.98■□□□□ 0.31
SHANK3-203ENST00000445220 PHYHIPLQ96FC7 376 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF320A2RRD8 509 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 CTNSO60931 367 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 UTS2O95399 124 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 HRH1P35367 487 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 LYSMD4Q5XG99 296 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 EXD3Q8N9H8 876 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF845Q96IR2 970 aaPredicted RBP16.98■□□□□ 0.31
SHANK3-203ENST00000445220 THAP10Q9P2Z0 257 aaPredicted RBP16.98■□□□□ 0.31
SHANK3-203ENST00000445220 LRP3O75074 770 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 SLC35E2P0CK97 266 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 KIAA1958Q8N8K9 716 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 NUDCD2Q8WVJ2 157 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 EDAQ92838 391 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 PRO1933Q9H354 126 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 DUSP22Q9NRW4 184 aa16.98■□□□□ 0.31
SHANK3-203ENST00000445220 SEC14L6B5MCN3 397 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 HCRTR1O43613 425 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A6P0DMU7 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A5P0DMU8 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A7P0DMV0 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A8P0DMV1 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A9P0DMV2 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 DVL1P1P54792 670 aaPredicted RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 TGFBR3Q03167 851 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 C19orf57Q0VDD7 668 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 TMEM176BQ3YBM2 270 aaPredicted RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A2Q5DJT8 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A1Q5HYN5 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 RFLNAQ6ZTI6 216 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 LANCL3Q6ZV70 420 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 TMEM229BQ8NBD8 167 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 SLC38A9Q8NBW4 561 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CT45A3Q8NHU0 189 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF596Q8TC21 504 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 TTC9Q92623 222 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 NTNG1Q9Y2I2 539 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 RAB27BO00194 218 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CTXN2P0C2S0 81 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 RPL27P61353 136 aaKnown RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 ERV3-1Q14264 604 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 FAM209AQ5JX71 171 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 GGNBP1Q5YKI7 109 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 MED25Q71SY5 747 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 LINC00052Q96N35 136 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 ISG20L2Q9H9L3 353 aaKnown RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 MTCH1Q9NZJ7 389 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF816-ZNF321PA0A0X1KG74 233 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 OTUD1Q5VV17 481 aaPredicted RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF321PQ8N8H1 164 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 OR14A16Q8NHC5 309 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 KCNJ15Q99712 375 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms