RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ENPP4Q9Y6X5 453 aa12.97□□□□□ -0.33
SEC13-213ENST00000445064 IGHV3-64DA0A0J9YX35 117 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 OR6C6A6NF89 314 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 SLC22A2O15244 555 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 PRTN3P24158 256 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 CD80P33681 288 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 MDH2P40926 338 aaKnown RBP12.96□□□□□ -0.33
SEC13-213ENST00000445064 CDKN2AP42771 156 aaKnown RBP12.96□□□□□ -0.33
SEC13-213ENST00000445064 CENPAP49450 140 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 FXYD6P3P58550 94 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 BAMBIQ13145 260 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 ESCO2Q56NI9 601 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 GPR139Q6DWJ6 353 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 PTCHD4Q6ZW05 846 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.96□□□□□ -0.33
SEC13-213ENST00000445064 OR8G5Q8NG78 346 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 OR10AD1Q8NGE0 317 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 FAM162AQ96A26 154 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.33
SEC13-213ENST00000445064 TSSK2Q96PF2 358 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 GPA33Q99795 319 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 ZNF747Q9BV97 191 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 ANKRD19PQ9H560 264 aa12.96□□□□□ -0.33
SEC13-213ENST00000445064 VSX1Q9NZR4 365 aaPredicted RBP12.96□□□□□ -0.33
SEC13-213ENST00000445064 IGHV3OR16-10A0A075B7F0 116 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 DNAJC9-AS1A6NH13 148 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 CEACAM18A8MTB9 384 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 A8MXK9 166 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 CYB5R3P00387 301 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 H1F0P07305 194 aaKnown RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 OMPP47874 163 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 RGS6P49758 472 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 MMP16P51512 607 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 PAX8Q06710 450 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 DBPQ10586 325 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 KCNMB1Q16558 191 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 MEP1BQ16820 701 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 SLC27A4Q6P1M0 643 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 FBXW12Q6X9E4 464 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 JAZF1Q86VZ6 243 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 OR52E2Q8NGJ4 325 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 MEGF10Q96KG7 1140 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 ZNF582Q96NG8 517 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 WDR76Q9H967 626 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 EFCAB1Q9HAE3 211 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 TMEM165Q9HC07 324 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 OR5V1Q9UGF6 321 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
SEC13-213ENST00000445064 FAM32AQ9Y421 112 aaKnown RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
SEC13-213ENST00000445064 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 DCTN6O00399 190 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 TMPRSS2O15393 492 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 DIRAS1O95057 198 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 DGCR6Q14129 220 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 SEC23BQ15437 767 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 RSPO1Q2MKA7 263 aaPredicted RBP12.94□□□□□ -0.34
SEC13-213ENST00000445064 CORO6Q6QEF8 472 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 TAF15Q92804 592 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC13-213ENST00000445064 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
SEC13-213ENST00000445064 GPX7Q96SL4 187 aaPredicted RBP12.94□□□□□ -0.34
SEC13-213ENST00000445064 SSBP3Q9BWW4 388 aaPredicted RBP12.94□□□□□ -0.34
SEC13-213ENST00000445064 SRA1Q9HD15 236 aaKnown RBP12.94□□□□□ -0.34
SEC13-213ENST00000445064 NDUFAF4Q9P032 175 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 RPS6KA6Q9UK32 745 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 AURKCQ9UQB9 309 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 LRCH1Q9Y2L9 728 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 LHFPL6Q9Y693 200 aa12.94□□□□□ -0.34
SEC13-213ENST00000445064 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 UNC119BA6NIH7 251 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 F5H5P2 479 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 MLNRO43193 412 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 RPS2P15880 293 aaKnown RBP12.93□□□□□ -0.34
SEC13-213ENST00000445064 RHCEP18577 417 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 PMELP40967 661 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 SRP9P49458 86 aaKnown RBP12.93□□□□□ -0.34
SEC13-213ENST00000445064 RPS6KA3P51812 740 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 PRSS12P56730 875 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 GNB2P62879 340 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 PAX2Q02962 417 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 FAM201AQ5SY85 155 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 GLYATQ6IB77 296 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 HIST2H3AQ71DI3 136 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 ADCK1Q86TW2 530 aa12.93□□□□□ -0.34
SEC13-213ENST00000445064 MOGAT3Q86VF5 341 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms