RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 LRRC30A6NM36 301 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 SGCEO43556 437 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 DOK2O60496 412 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 TSPAN9O75954 239 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 LIPFP07098 398 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 VIMP08670 466 aaKnown RBP11.92□□□□□ -0.5
HMGN1-208ENST00000443046 HTR5AP47898 357 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 NPY4RP50391 375 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 SCRN3Q0VDG4 424 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 FHL1Q13642 323 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 SELPLGQ14242 412 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 OR5AS1Q8N127 324 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 Q8TCH9 128 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 TRIM15Q9C019 465 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 POLR2J2Q9GZM3 115 aaKnown RBP11.92□□□□□ -0.5
HMGN1-208ENST00000443046 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 POLR2J3Q9H1A7 115 aaKnown RBP11.92□□□□□ -0.5
HMGN1-208ENST00000443046 EMC7Q9NPA0 242 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 RIMS3Q9UJD0 308 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 F5H5P2 479 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 PIN1P1O15428 100 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 TOX4O94842 621 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 OR5F1O95221 314 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-208ENST00000443046 CYP51A1Q16850 503 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 OR2T2Q6IF00 324 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 CCDC80Q76M96 950 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 RASD2Q96D21 266 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 WDFY2Q96P53 400 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 CENPHQ9H3R5 247 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 KAT8Q9H7Z6 458 aaKnown RBP11.91□□□□□ -0.5
HMGN1-208ENST00000443046 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 CTSZQ9UBR2 303 aa11.91□□□□□ -0.5
HMGN1-208ENST00000443046 IGHV3-64DA0A0J9YX35 117 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 A0A0U1RQK1 487 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 HTR3EA5X5Y0 456 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 A6NIZ1 184 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 IQCF6A8MYZ5 107 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 OPN1MWP04001 364 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CSF1P09603 554 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 OPN1MW2P0DN77 364 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 OPN1MW3P0DN78 364 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 RGS6P49758 472 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 IDH3AP50213 366 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 GZMMP51124 257 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 RAD23AP54725 363 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 MTPNP58546 118 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CTXN1P60606 82 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 RAP1BP61224 184 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 RAP1AP62834 184 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 MAB21L1Q13394 359 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 PIN1Q13526 163 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CLEC12AQ5QGZ9 265 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CD276Q5ZPR3 534 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 DPP10Q8N608 796 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CELF2-AS1Q8N7Q2 184 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 RASSF5Q8WWW0 418 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 ERGIC1Q969X5 290 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 ZNF582Q96NG8 517 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-208ENST00000443046 CGREF1Q99674 301 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 EBF4Q9BQW3 602 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 PTTG3PQ9NZH4 202 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 ATPIF1Q9UII2 106 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
HMGN1-208ENST00000443046 DNAH9Q9NYC9 4486 aa11.9□□□□□ -0.51
HMGN1-208ENST00000443046 FBP2O00757 339 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 POLR3GO15318 223 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-208ENST00000443046 PIP5K1CO60331 668 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-208ENST00000443046 TAS2R41P59536 307 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 COX10Q12887 443 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 AQP6Q13520 282 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 AGKQ53H12 422 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 INTS11Q5TA45 600 aaKnown RBP11.89□□□□□ -0.51
HMGN1-208ENST00000443046 C1orf94Q6P1W5 598 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 IGFN1Q86VF2 1251 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 OR1F12Q8NHA8 337 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 SLC26A7Q8TE54 656 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 CCDC28BQ9BUN5 200 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 TMCC3Q9ULS5 477 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 SH3GLB1Q9Y371 365 aa11.89□□□□□ -0.51
HMGN1-208ENST00000443046 ZNF816-ZNF321PA0A0X1KG74 233 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 FCN3O75636 299 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 DBHP09172 617 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 TNFRSF1BP20333 461 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 PNLDC1Q8NA58 520 aaKnown RBP11.88□□□□□ -0.51
HMGN1-208ENST00000443046 FAM156AQ8NDB6 213 aa11.88□□□□□ -0.51
HMGN1-208ENST00000443046 C19orf18Q8NEA5 215 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms