RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SIGLEC7Q9Y286 467 aa7.56□□□□□ -1.2
USP6NL-203ENST00000443016 GMPPBQ9Y5P6 360 aa7.56□□□□□ -1.2
USP6NL-203ENST00000443016 F5H0A9 414 aaPredicted RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 IFNA2P01563 188 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SNRNP70P08621 437 aaKnown RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 PGA4P0DJD7 388 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 PGA3P0DJD8 388 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 AQP2P41181 271 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 RPS23P62266 143 aaKnown RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 MYBPC1Q00872 1141 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 RAB39AQ14964 217 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 ALG10Q5BKT4 473 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 C6orf52Q5T4I8 152 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 TMEM54Q969K7 222 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 PLEKHA8Q96JA3 519 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 MBOAT4Q96T53 435 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 GPA33Q99795 319 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 IFT27Q9BW83 186 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 TSSK6Q9BXA6 273 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 EGLN3Q9H6Z9 239 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SLC25A19Q9HC21 320 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 INIPQ9NRY2 104 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 IL20Q9NYY1 176 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 FBXL3Q9UKT7 428 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 CUBNO60494 3623 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 DNHD1Q96M86 4753 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 M0R233 179 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SLC16A6O15403 523 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 ADRA2AP08913 450 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 APEHP13798 732 aaKnown RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 DAOP14920 347 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 ZNF14P17017 642 aaPredicted RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 NOS3P29474 1203 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 NR4A2P43354 598 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 CD47Q08722 323 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SLC36A2Q495M3 483 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 CYB5R2Q6BCY4 276 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SLC16A14Q7RTX9 510 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 C8orf59Q8N0T1 100 aaPredicted RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 NEU4Q8WWR8 484 aaPredicted RBP7.55□□□□□ -1.2
USP6NL-203ENST00000443016 MCHR2Q969V1 340 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 SAMD8Q96LT4 415 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 PITX2Q99697 317 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 BEX2Q9BXY8 128 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 KCNN2Q9H2S1 579 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 TMEM38BQ9NVV0 291 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 FAM118AQ9NWS6 357 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 ZNF224Q9NZL3 707 aa7.55□□□□□ -1.2
USP6NL-203ENST00000443016 A0A096LNT2 108 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 ZAR1LA6NP61 321 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 IFNGP01579 166 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 HMGN1P05114 100 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 SERPINA5P05154 406 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 ACADSP16219 412 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GRK5P34947 590 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GLRXP35754 106 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GUCA1AP43080 201 aaPredicted RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 SELENOVP59797 346 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 PLP2Q04941 152 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 RUNX1T1Q06455 604 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 PTGES3Q15185 160 aaKnown RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 CLEC12AQ5QGZ9 265 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 DPY19L2P2Q6ZN68 376 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 KRT74Q7RTS7 529 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 LRRC18Q8N456 261 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 NOXO1Q8NFA2 376 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 FAM81AQ8TBF8 368 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 MUL1Q969V5 352 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 MRPL24Q96A35 216 aaKnown RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 HRASLS5Q96KN8 279 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 DOK1Q99704 481 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 SYT3Q9BQG1 590 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 BPESC1Q9GZL8 116 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 TPK1Q9H3S4 243 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 CHODLQ9H9P2 273 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 FZR1Q9UM11 496 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 CHD3Q12873 2000 aaKnown RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 RIIAD1A6NNX1 92 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 TXNL1O43396 289 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 SYNGR3O43761 229 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 IDH3BO43837 385 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 MPZL2O60487 215 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 NR2C1P13056 603 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 ZNF35P13682 527 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GGT2P36268 569 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GZMKP49863 264 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 ADARB1P78563 741 aaKnown RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 TOP3AQ13472 1001 aaPredicted RBP7.54□□□□□ -1.2
USP6NL-203ENST00000443016 MED21Q13503 144 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 GINS1Q14691 196 aa7.54□□□□□ -1.2
USP6NL-203ENST00000443016 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms