RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SNX33Q8WV41 574 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 RNF133Q8WVZ7 376 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ASB17Q8WXJ9 295 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 SPTSSAQ969W0 71 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 OR8B4Q96RC9 309 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 DDX28Q9NUL7 540 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 SLCO1C1Q9NYB5 712 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 PSORS1C1Q9UIG5 152 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 GRIP1Q9Y3R0 1128 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 LRP12Q9Y561 859 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 N6AMT1Q9Y5N5 214 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 HCFC1P51610 2035 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 J3QRE1 110 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 M0R135 149 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 PLAUP00749 431 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 KRT8P05787 483 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ANXA2P07355 339 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 SLC2A1P11166 492 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 PIPP12273 146 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 MYL12AP19105 171 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 OPRL1P41146 370 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 GRB2P62993 217 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ECH1Q13011 328 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 TP53I3Q53FA7 332 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF704Q6ZNC4 412 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 FAM220AQ7Z4H9 259 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ABHD4Q8TB40 342 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 SGCDQ92629 289 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF799Q96GE5 643 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 TMEM80Q96HE8 168 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ALG8Q9BVK2 526 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 MROQ9BYG7 248 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ELOVL3Q9HB03 270 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 FGF20Q9NP95 211 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 BRD7Q9NPI1 651 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 PAK1IP1Q9NWT1 392 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 ATPIF1Q9UII2 106 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 GNG8Q9UK08 70 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 BLOC1S6Q9UL45 172 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 GTF2A1LQ9UNN4 478 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 TPRKBQ9Y3C4 175 aa11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 UTP20O75691 2785 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-204ENST00000442842 SMPD2O60906 423 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 RPP14O95059 124 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 IGHA1P01876 353 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ADRA2AP08913 450 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 LOXP28300 417 aaPredicted RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 WNT5AP41221 380 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 RIDAP52758 137 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 TPTEP56180 551 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 CSNK2BP67870 215 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 MVKQ03426 396 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 EGR3Q06889 387 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ST3GAL4Q11206 333 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 DAZAP2Q15038 168 aaPredicted RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 RBM48Q5RL73 367 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 RFPL4BQ6ZWI9 263 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 YIPF7Q8N8F6 280 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 IL17RDQ8NFM7 739 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 DOK1Q99704 481 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 KCNJ15Q99712 375 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 DIDO1Q9BTC0 2240 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ACOXLQ9NUZ1 547 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 ERVK13-1Q9NX77 482 aa11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 EIF3KQ9UBQ5 218 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 MRM2Q9UI43 246 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 DIMT1Q9UNQ2 313 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 EXOSC1Q9Y3B2 195 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-204ENST00000442842 J3QLW9 94 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 MYL12BO14950 172 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 GPRIN2O60269 458 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 LCKP06239 509 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ACSM4P0C7M7 580 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF35P13682 527 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF19P17023 458 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 CRHBPP24387 322 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 DCKP27707 260 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ETV1P50549 477 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ACTA2P62736 377 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ACTG2P63267 376 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ROM1Q03395 351 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 TLE4Q04727 773 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms