RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 MFGE8Q08431 387 aaPredicted RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 CLN3Q13286 438 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TAB1Q15750 504 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SLC25A35Q3KQZ1 300 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SLC16A14Q7RTX9 510 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 BTLAQ7Z6A9 289 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZIC4Q8N9L1 334 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 IL17RDQ8NFM7 739 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 OR4M1Q8NGD0 313 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ITFG2Q969R8 447 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 FOXB1Q99853 325 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CCDC86Q9H6F5 360 aaKnown RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 RNF121Q9H920 327 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TMEM38BQ9NVV0 291 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZNF391Q9UJN7 358 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 FOXD3Q9UJU5 478 aaPredicted RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 N6AMT1Q9Y5N5 214 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SLC17A2O00624 439 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CPN1P15169 458 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 RAB3AP20336 220 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CTSSP25774 331 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 BDKRB2P30411 391 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 BCAP31P51572 246 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CEACAM16Q2WEN9 425 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SLC36A2Q495M3 483 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DRAM2Q6UX65 266 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF813Q6ZN06 617 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SERPINA12Q8IW75 414 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 OR52H1Q8NGJ2 320 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DEFB127Q9H1M4 99 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 GPR35Q9HC97 309 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 G6PC2Q9NQR9 355 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DDX28Q9NUL7 540 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 C14orf119Q9NWQ9 140 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FAM206AQ9NX38 181 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DLL3Q9NYJ7 618 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ATPIF1Q9UII2 106 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 AHCTF1Q8WYP5 2266 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 TTC28Q96AY4 2481 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 A0A1B0GTH9 108 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 OR6C6A6NF89 314 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SLC22A20A6NK97 555 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DOK2O60496 412 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 YES1P07947 543 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF121P58317 390 aaPredicted RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 PLP2Q04941 152 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 IGFL2Q6UWQ7 119 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FAM57BQ71RH2 274 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 LRRTM1Q86UE6 522 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CDH26Q8IXH8 852 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 JAGN1Q8N5M9 183 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 PNLDC1Q8NA58 520 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 HTRA1Q92743 480 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SORCS2Q96PQ0 1159 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 PPIL3Q9H2H8 161 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 PPP1R3EQ9H7J1 279 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CALHM2Q9HA72 323 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 RHBDL2Q9NX52 303 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FBXL3Q9UKT7 428 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 MRPS7Q9Y2R9 242 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 LAMA3Q16787 3333 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 OTOGLQ3ZCN5 2332 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CPAMD8Q8IZJ3 1885 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 LOC100289279A0A1B0GTE1 492 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 A0A1B0GVG6 124 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 LINC00854A0A1B0GVQ3 168 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FAM240BA0A1B0GVZ2 78 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 METTL21EPA6NDL7 271 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 M0R135 149 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 DVL2O14641 736 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CTDSPLO15194 276 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 KLK10O43240 276 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SRSF10O75494 262 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 ECDO95905 644 aaPredicted RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 PNPP00491 289 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 EIF4EP06730 217 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 ACSM4P0C7M7 580 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 KLK2P20151 261 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 THBS2P35442 1172 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 THBS4P35443 961 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FAUP35544 74 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 GALK2Q01415 458 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ENDOGQ14249 297 aaKnown RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF79Q15937 498 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 RSBN1Q5VWQ0 802 aaPredicted RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 OTPQ5XKR4 325 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 PLET1Q6UQ28 207 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CFAP77Q6ZQR2 320 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 LINGO2Q7L985 606 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ASCL5Q7RTU5 278 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF554Q86TJ5 538 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 RDH10Q8IZV5 341 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 UBE2J2Q8N2K1 259 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 SLC22A24Q8N4F4 322 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 FDCSPQ8NFU4 85 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 OR1M1Q8NGA1 313 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 OR1F12Q8NHA8 337 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ASB5Q8WWX0 329 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms