RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 H2AFJQ9BTM1 129 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 C20orf27Q9GZN8 174 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 RHOJQ9H4E5 214 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TXNRD2Q9NNW7 524 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SLC45A2Q9UMX9 530 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 USP22Q9UPT9 525 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 PRSS51A0A1B0GVH4 220 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TRIM49D1C9J1S8 452 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SLC31A1O15431 190 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 OR2B3O76000 313 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 NFATC1O95644 943 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 CYBBP04839 570 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 C4BPBP20851 252 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 PTGER1P34995 402 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 BDKRB1P46663 353 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SLC6A8P48029 635 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 BTN3A2P78410 334 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 ZIC1Q15915 447 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF74Q16587 644 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 CTU2Q2VPK5 515 aaKnown RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SEM1Q6ZVN7 128 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 CYGBQ8WWM9 190 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 FCAMRQ8WWV6 532 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 RORBQ92753 470 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 JSRP1Q96MG2 331 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 LINC00052Q96N35 136 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 CLN6Q9NWW5 311 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF230Q9UIE0 474 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SCN10AQ9Y5Y9 1956 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3IA0A087WXS9 549 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 HSPB2A8KAH6 182 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 GFYI3L273 518 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 M0QYG6 137 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3HP0C7X1 549 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 FPR2P25090 351 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 F2RP25116 425 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CDAP32320 146 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 ELK3P41970 407 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 HSPB2Q16082 182 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CYBRD1Q53TN4 286 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CES5AQ6NT32 575 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DNAJC24Q6P3W2 148 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DEFB107AQ8IZN7 70 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 OR6N2Q8NGY6 317 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TFB1MQ8WVM0 346 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 AGAP4Q96P64 663 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 PRO3102Q9H379 93 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DHX35Q9H5Z1 703 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CDC42EP3Q9UKI2 254 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF195O14628 629 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MPZL2O60487 215 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 SNAP91O60641 907 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CBX7O95931 251 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TYMSP04818 313 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CXCL8P10145 99 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 ERVFRD-1P60508 538 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MAD2L1Q13257 205 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TSNQ15631 228 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 ACKR1Q16570 336 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 SRSF7Q16629 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 HLA-BQ31612 363 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DCAF4L1Q3SXM0 396 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 GPRC6AQ5T6X5 926 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 EEF1DP3Q658K8 133 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 LANCL3Q6ZV70 420 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 WDR53Q7Z5U6 358 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 IGDCC3Q8IVU1 814 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 FBXO16Q8IX29 292 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MDS2Q8NDY4 140 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 OR10A6Q8NH74 314 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 JOSD2Q8TAC2 188 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 PAAF1Q9BRP4 392 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 LHPPQ9H008 270 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CRISPLD1Q9H336 500 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 SLC6A20Q9NP91 592 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CISHQ9NSE2 258 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CCL25O15444 150 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 PRKCGP05129 697 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 IL7P13232 177 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 RABGGTBP53611 331 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TAS2R38P59533 333 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 SPIN4Q56A73 249 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 EMC4Q5J8M3 183 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 FFAR4Q5NUL3 377 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 TEDDM1Q5T9Z0 273 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DOK3Q7L591 496 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 OR4D5Q8NGN0 318 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MSI2Q96DH6 328 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms