RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SSX5O60225 188 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 P04436 131 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TBXA2RP21731 343 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CX3CR1P49238 355 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CSNK1EP49674 416 aaKnown RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CCR5P51681 352 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 GFERP55789 205 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 BAMBIQ13145 260 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MFAP5Q13361 173 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CBLN3Q6UW01 205 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 EXD3Q8N9H8 876 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 OR4S1Q8NGB4 309 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MARCH1Q8TCQ1 289 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 HSD17B8Q92506 261 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ANKRD9Q96BM1 317 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 VSTM2LQ96N03 204 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 NKX3-1Q99801 234 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 SARGQ9BW04 601 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 OPN4Q9UHM6 478 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 FBXO4Q9UKT5 387 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ICAM5Q9UMF0 924 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 SLC5A6Q9Y289 635 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 B3GALT5Q9Y2C3 310 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 LRP12Q9Y561 859 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ARPC4-TTLL3A0A0A6YYG9 625 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 IGHV3-20A0A0C4DH32 117 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SPTY2D1-AS1A0A0U1RR47 76 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 NUDT19A8MXV4 375 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 H3BUI4 141 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SPINT1O43278 529 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TNFSF14O43557 240 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TPPPO94811 219 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GPANK1O95872 356 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 WNT11O96014 354 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 IFNA17P01571 189 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ADRA2AP08913 450 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GABRA1P14867 456 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CNR1P21554 472 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 AGFG1P52594 562 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GPR85P60893 370 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 DHRS2Q13268 280 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 C14orf28Q4W4Y0 310 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 FBXW12Q6X9E4 464 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 OR14L1PQ8NHC6 308 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ST8SIA1Q92185 356 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 EDAQ92838 391 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TCEAL3Q969E4 200 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 MRPL38Q96DV4 380 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TSPAN32Q96QS1 320 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CNTNAP3Q9BZ76 1288 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PLA2G2FQ9BZM2 168 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ZCCHC4Q9H5U6 513 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 FAM60AQ9NP50 221 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 EXOSC3Q9NQT5 275 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 FRRS1LQ9P0K9 344 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ANKRD36A6QL64 1941 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 OR4C45A6NMZ5 311 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SHOXO15266 292 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 DDAH2O95865 285 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GNB3P16520 340 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 MSX1P28360 303 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 AVPR2P30518 371 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SLC35A1P78382 337 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 MALLQ13021 153 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 DOK3Q7L591 496 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 KCNRGQ8N5I3 272 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 S100PBPQ96BU1 408 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PGLYRP3Q96LB9 341 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 RPP25Q9BUL9 199 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PBX4Q9BYU1 374 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 MOB1AQ9H8S9 216 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF275Q9NSD4 429 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ALKBH4Q9NXW9 302 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 NTMQ9P121 344 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 KLF15Q9UIH9 416 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CEP290O15078 2479 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 A0A0B4J293 547 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM272A0A1B0GTI8 110 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 C4orf51C9J302 202 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 IFNA2P01563 188 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ANKRD34CP0C6C1 535 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PI3P19957 117 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CD27P26842 260 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ACAA2P42765 397 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ATP1B3P54709 279 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 OR1D5P58170 312 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GRB2P62993 217 aaKnown RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PLGLB1Q02325 96 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PDZK1IP1Q13113 114 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 HMGN3Q15651 99 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PRAMEF20Q5VT98 475 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 B3GNTL1Q67FW5 361 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 OPN5Q6U736 354 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 NPSR1Q6W5P4 371 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 HSD17B13Q7Z5P4 300 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CMTM1Q8IZ96 169 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms