RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LIPEQ05469 1076 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 PRKCDQ05655 676 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZNF154Q13106 437 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 PGM2L1Q6PCE3 622 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 MBOAT2Q6ZWT7 520 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 DOK3Q7L591 496 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 VTCN1Q7Z7D3 282 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.54□□□□□ -1.36
VPS50-203ENST00000436177 C1orf87Q8N0U7 546 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR5AS1Q8N127 324 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZNF283Q8N7M2 679 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 DEFB108BQ8NET1 73 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR13G1Q8NGZ3 307 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 RASD2Q96D21 266 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 Q96M85 177 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ZNF582Q96NG8 517 aaPredicted RBP6.54□□□□□ -1.36
VPS50-203ENST00000436177 DUX5Q96PT3 197 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR2V2Q96R30 315 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 SSBP3Q9BWW4 388 aaPredicted RBP6.54□□□□□ -1.36
VPS50-203ENST00000436177 HCAR1Q9BXC0 346 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 SYT4Q9H2B2 425 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ANKRD19PQ9H560 264 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 PATZ1Q9HBE1 687 aaKnown RBP6.54□□□□□ -1.36
VPS50-203ENST00000436177 ESM1Q9NQ30 184 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 SAR1AQ9NR31 198 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 IL19Q9UHD0 177 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 EGFL7Q9UHF1 273 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 IL20RAQ9UHF4 553 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OPN4Q9UHM6 478 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 ATPIF1Q9UII2 106 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 A4GNTQ9UNA3 340 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 AURKCQ9UQB9 309 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 PCDHGB1Q9Y5G3 927 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 POM121CA8CG34 1229 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 CEACAM18A8MTB9 384 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 J3KTA2 159 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 SOCS2O14508 198 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 SERPINA1P01009 418 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 FSHBP01225 129 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 H1F0P07305 194 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 HKR1P10072 659 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 CTLA4P16410 223 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 SELEP16581 610 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 ZNF12P17014 697 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 CPT2P23786 658 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 SDHAP31040 664 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 RPS6KA3P51812 740 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 SLC7A2P52569 658 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 LSM6P62312 80 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 GNB2P62879 340 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 IL13RA1P78552 427 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 MALLQ13021 153 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 KRT72Q14CN4 511 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 MESTQ5EB52 335 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 JAZF1Q86VZ6 243 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 LRRC28Q86X40 367 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 ZDHHC22Q8N966 263 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 FAM156AQ8NDB6 213 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 BHLHE23Q8NDY6 225 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 OR52E2Q8NGJ4 325 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 OR11L1Q8NGX0 322 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 FANK1Q8TC84 345 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 DVL3Q92997 716 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 PTP4A1Q93096 173 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 APOBEC3DQ96AK3 386 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 HAVCR1Q96D42 359 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 FAM46AQ96IP4 442 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 RSRC1Q96IZ7 334 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 KCTD14Q9BQ13 255 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 SSBP4Q9BWG4 385 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 HDHD2Q9H0R4 259 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 NMNAT1Q9HAN9 279 aaPredicted RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 MMP26Q9NRE1 261 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 DCAF16Q9NXF7 216 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 PTTG3PQ9NZH4 202 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 ZNF69Q9UC07 566 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 MIOXQ9UGB7 285 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 KLHL21Q9UJP4 597 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 RPS6KA6Q9UK32 745 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 STARD10Q9Y365 291 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 NOP16Q9Y3C1 178 aaKnown RBP6.53□□□□□ -1.36
VPS50-203ENST00000436177 INSIG2Q9Y5U4 225 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 ENPP4Q9Y6X5 453 aa6.53□□□□□ -1.36
VPS50-203ENST00000436177 A0A087WUU8 490 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 TRAV40A0A0B4J280 105 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 A8MXK9 166 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 TMEM178BH3BS89 294 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 CDC42EP2O14613 210 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 CCDC22O60826 627 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 RENP00797 406 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 CRYBA1P05813 215 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms