RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 TMED9Q9BVK6 235 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF416Q9BWM5 594 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 SIAEQ9HAT2 523 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 MALT1Q9UDY8 824 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 PRSS50Q9UI38 385 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 LRP12Q9Y561 859 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 PHF3Q92576 2039 aaKnown RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 TRIM64BA6NI03 449 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF878C9JN71 531 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 E9PLN8 166 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 GPX5O75715 221 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CD1AP06126 327 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CST2P09228 141 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 H2BFMP0C1H6 154 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 B4GALT1P15291 398 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 OPRL1P41146 370 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CRYBB2P43320 205 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 NANOS3P60323 173 aaKnown RBP9.88□□□□□ -0.83
LINC00539-203ENST00000434601 VBP1P61758 197 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 SLC3A1Q07837 685 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 FAPQ12884 760 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 ALKBH1Q13686 389 aaKnown RBP9.88□□□□□ -0.83
LINC00539-203ENST00000434601 TRAM1Q15629 374 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 FBXW9Q5XUX1 488 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 RTL6Q6ICC9 239 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 KLHL24Q6TFL4 600 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 TFAP2EQ6VUC0 442 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 GDPGP1Q6ZNW5 385 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 UBE2J2Q8N2K1 259 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 LRRC18Q8N456 261 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 SLC22A24Q8N4F4 322 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 OR10S1Q8NGN2 331 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 NDNFQ8TB73 568 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CA5BP1Q8WTZ4 195 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 HSD17B8Q92506 261 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 TMEM203Q969S6 136 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
LINC00539-203ENST00000434601 PGLYRP3Q96LB9 341 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 COQ7Q99807 217 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 VKORC1Q9BQB6 163 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CENPOQ9BU64 300 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 EXOSC4Q9NPD3 245 aaKnown RBP9.88□□□□□ -0.83
LINC00539-203ENST00000434601 PNRC2Q9NPJ4 139 aaKnown RBP9.88□□□□□ -0.83
LINC00539-203ENST00000434601 CENPMQ9NSP4 180 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 COQ3Q9NZJ6 369 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 FAM215AQ9Y5M1 114 aa9.88□□□□□ -0.83
LINC00539-203ENST00000434601 SPG11Q96JI7 2443 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HCFC1P51610 2035 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 TRBV2A0A0J9YWF9 115 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 TRDV1A0A1B0GX56 115 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 A0A1W2PPW3 197 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 RER1O15258 196 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 GPRIN2O60269 458 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 RGS9O75916 674 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 FARS2O95363 451 aaKnown RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HLA-DPB1P04440 258 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HOXD4P09016 255 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 GALP22466 123 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 MPGP29372 298 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 KIR2DL2P43627 348 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 SH3BGRP55822 239 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ARF1P84077 181 aaKnown RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 FABP5Q01469 135 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 SCRN3Q0VDG4 424 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 SPCS2Q15005 226 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF829Q3KNS6 432 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF544Q6NX49 715 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 FDX2Q6P4F2 183 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF813Q6ZN06 617 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 RHOUQ7L0Q8 258 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF627Q7L945 461 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 MED12LQ86YW9 2145 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ALDH16A1Q8IZ83 802 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 CNEP1R1Q8N9A8 125 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 KBTBD8Q8NFY9 601 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 OR2G2Q8NGZ5 317 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 GHSRQ92847 366 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 FBXO17Q96EF6 278 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 TRMT61AQ96FX7 289 aaKnown RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 C4orf45Q96LM5 186 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ZFP3Q96NJ6 502 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 DCUN1D5Q9BTE7 237 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 TP63Q9H3D4 680 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 DDX28Q9NUL7 540 aaKnown RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 ITGB1BP2Q9UKP3 347 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 FBXL3Q9UKT7 428 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 R4GMQ9 66 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 AKAP9Q99996 3911 aa9.87□□□□□ -0.83
LINC00539-203ENST00000434601 MAP1AP78559 2803 aaPredicted RBP9.87□□□□□ -0.83
LINC00539-203ENST00000434601 DOCK7Q96N67 2140 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 TMEM212A6NML5 194 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms