RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 DIRC2Q96SL1 478 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 KCTD14Q9BQ13 255 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 SRA1Q9HD15 236 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
SMARCE1-205ENST00000431889 OR6C6A6NF89 314 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 TMEM178BH3BS89 294 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 MLNRO43193 412 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 NDUFB2O95178 105 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 H1F0P07305 194 aaKnown RBP11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 TNFRSF1AP19438 455 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 SDHAP31040 664 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 CD80P33681 288 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 OMPP47874 163 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 LIMS1P48059 325 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 BAMBIQ13145 260 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 RBMS3Q6XE24 437 aaKnown RBP11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 SPICQ8N5J4 248 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 RP9Q8TA86 221 aaKnown RBP11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 NDUFAF4Q9P032 175 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 CGGBP1Q9UFW8 167 aaPredicted RBP11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 IL19Q9UHD0 177 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 LHFPL6Q9Y693 200 aa11.96□□□□□ -0.5
SMARCE1-205ENST00000431889 MEGF8Q7Z7M0 2845 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 H3BSA7 217 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 COX5BP10606 129 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 ZNF12P17014 697 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 ANOS1P23352 680 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 OMGP23515 440 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 GATA3P23771 443 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 PMELP40967 661 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 C8orf82Q6P1X6 216 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 LEG1Q6P5S2 330 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 CFAP77Q6ZQR2 320 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 ZER1Q7Z7L7 766 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 CYP4Z1Q86W10 505 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 PTP4A1Q93096 173 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 ERMAPQ96PL5 475 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 NRIP3Q9NQ35 241 aa11.95□□□□□ -0.5
SMARCE1-205ENST00000431889 UNC119BA6NIH7 251 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 RPS27P42677 84 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 RSPO1Q2MKA7 263 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 TMEM155Q4W5P6 130 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 NMNAT3Q96T66 252 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 MRI1Q9BV20 369 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 MS4A7Q9GZW8 240 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 UFSP2Q9NUQ7 469 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 OR5V1Q9UGF6 321 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 AURKCQ9UQB9 309 aa11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 FAM32AQ9Y421 112 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-205ENST00000431889 CMYA5Q8N3K9 4069 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 F5H5K5 113 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 WNT2P09544 360 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 RAC2P15153 192 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 MDH2P40926 338 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 PSME3P61289 254 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 ANKDD1AQ495B1 522 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 PRAMEF6Q5VXH4 476 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 BRD3OSQ6XYD6 125 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 ARPINQ7Z6K5 226 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 C1orf174Q8IYL3 243 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 OR6V1Q8N148 313 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 OR52E2Q8NGJ4 325 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 OR4K13Q8NH42 304 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 POP5Q969H6 163 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 ZNF582Q96NG8 517 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 SSBP3Q9BWW4 388 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 NTN4Q9HB63 628 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 RPRD1BQ9NQG5 326 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 ADA2Q9NZK5 511 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 TMEM5Q9Y2B1 443 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
SMARCE1-205ENST00000431889 TRAV40A0A0B4J280 105 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 HTR3EA5X5Y0 456 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 TMPRSS2O15393 492 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 HKR1P10072 659 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 PRTN3P24158 256 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 GNB2P62879 340 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 SRSF4Q08170 494 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 SLC35F1Q5T1Q4 408 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 SLC27A4Q6P1M0 643 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 SMARCD3Q6STE5 483 aa11.92□□□□□ -0.5
SMARCE1-205ENST00000431889 DOK3Q7L591 496 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms