RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RPS6KA6Q9UK32 745 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 DOCK11Q5JSL3 2073 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 DNAJC9-AS1A6NH13 148 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 PTP4A3O75365 173 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 FSTL3O95633 263 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 H1F0P07305 194 aaKnown RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 CRABP1P29762 137 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 SRP9P49458 86 aaKnown RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 RPS6KA3P51812 740 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.413e-13■■■■□ 21.7
MSH5-208ENST00000429846 KCNMB1Q16558 191 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 ZNF181Q2M3W8 571 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 CCDC92Q53HC0 331 aaPredicted RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 ATG16L2Q8NAA4 619 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 GJC3Q8NFK1 279 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 OR13G1Q8NGZ3 307 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 SLC7A6Q92536 515 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 FAM162AQ96A26 154 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 MEGF10Q96KG7 1140 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 ZNF582Q96NG8 517 aaPredicted RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 COQ7Q99807 217 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 ZNF69Q9UC07 566 aa12.51□□□□□ -0.41
MSH5-208ENST00000429846 COA3Q9Y2R0 106 aaPredicted RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 FAM32AQ9Y421 112 aaKnown RBP12.51□□□□□ -0.41
MSH5-208ENST00000429846 CLDN34H7C241 214 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 RER1O15258 196 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 TXNDC12O95881 172 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 COX4I1P13073 169 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 RHCEP18577 417 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 OMPP47874 163 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 GSK3BP49841 420 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 ERFP50548 548 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 HNRNPA0Q13151 305 aaKnown RBP12.5□□□□□ -0.41
MSH5-208ENST00000429846 FGD3Q5JSP0 725 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
MSH5-208ENST00000429846 PRR31Q5SQ13 230 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
MSH5-208ENST00000429846 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 DPY19L2P2Q6ZN68 376 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 C9orf139Q6ZV77 190 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 C1orf87Q8N0U7 546 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 OR5AS1Q8N127 324 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 OR10AD1Q8NGE0 317 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
MSH5-208ENST00000429846 NUAK2Q9H093 628 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 RERGLQ9H628 205 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
MSH5-208ENST00000429846 MIOXQ9UGB7 285 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 AURKCQ9UQB9 309 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
MSH5-208ENST00000429846 LRRC30A6NM36 301 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 IQCF6A8MYZ5 107 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 SOCS2O14508 198 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 CCDC22O60826 627 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 DBHP09172 617 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 WNT2P09544 360 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 SELEP16581 610 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 MTNR1AP48039 350 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 HIST1H3AP68431 136 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 PAX8Q06710 450 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 BAMBIQ13145 260 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 HIST2H3PS2Q5TEC6 136 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 OR2T2Q6IF00 324 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 HIST2H3AQ71DI3 136 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 TSEN54Q7Z6J9 526 aaKnown RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 PARP8Q8N3A8 854 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 OR52E2Q8NGJ4 325 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 KCTD14Q9BQ13 255 aaPredicted RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 SLC30A2Q9BRI3 323 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 ZNF696Q9H7X3 374 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 PTTG3PQ9NZH4 202 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 NDUFAF4Q9P032 175 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 ABCD2Q9UBJ2 740 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 SAMD4AQ9UPU9 718 aaKnown RBP12.49□□□□□ -0.41
MSH5-208ENST00000429846 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
MSH5-208ENST00000429846 A0A1B0GWJ7 208 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 UNC119BA6NIH7 251 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 WIPF1O43516 503 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 GATA4P43694 442 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 NUDT2P50583 147 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 GNB2P62879 340 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 IL13RA1P78552 427 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 PAX2Q02962 417 aa12.48□□□□□ -0.41
MSH5-208ENST00000429846 COX10Q12887 443 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms