RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PBOV1Q9GZY1 135 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF69Q9UC07 566 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 A0A1W2PNR3 127 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF726A6NNF4 738 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SYT7O43581 403 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SNAPC5O75971 98 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ALX3O95076 343 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ACSM4P0C7M7 580 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 COX6A1P12074 109 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF28P17035 718 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 BDKRB2P30411 391 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 HTR2BP41595 481 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 EIF1AXP47813 144 aaKnown RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 TAS2R19P59542 299 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZP1P60852 638 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 PSMA6P60900 246 aaKnown RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 GALK2Q01415 458 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 C19orf57Q0VDD7 668 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 CAMK2DQ13557 499 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 C6orf183Q5T699 404 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 PRAMEF20Q5VT98 475 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SLC25A47Q6Q0C1 308 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 Q6ZTK2 550 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 CDH26Q8IXH8 852 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 OR5M1Q8NGP8 315 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SNAPC3Q92966 411 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 IMMP1LQ96LU5 166 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SEC22CQ9BRL7 303 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 AKIRIN1Q9H9L7 192 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 SEC61A2Q9H9S3 476 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 MGAT4CQ9UBM8 478 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF107Q9UII5 783 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 GDF2Q9UK05 429 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 MUC6Q6W4X9 2439 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 RALGAPA1Q6GYQ0 2036 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 DCDC2BA2VCK2 349 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 ANKRD34BA5PLL1 514 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 SULT2B1O00204 365 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 TSC22D2O75157 780 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 PMS2P2O95744 297 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 TTRP02766 147 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 TPOP07202 933 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 UMODP07911 640 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 ERCC1P07992 297 aaPredicted RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 GIPP09681 153 aaPredicted RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 SFTPDP35247 375 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 SSR4P51571 173 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 TAF13Q15543 124 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 INPP5JQ15735 1006 aaPredicted RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 KCNMB1Q16558 191 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 TMEM176BQ3YBM2 270 aaPredicted RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 RAB12Q6IQ22 244 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 ZNF627Q7L945 461 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 OR2Y1Q8NGV0 311 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 ZC3H10Q96K80 434 aaKnown RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 METTL17Q9H7H0 456 aaPredicted RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 TMEM138Q9NPI0 162 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
THBS3-202ENST00000428962 MRPS18BQ9Y676 258 aaKnown RBP12.17□□□□□ -0.46
THBS3-202ENST00000428962 METTL21EPA6NDL7 271 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 SCGNO76038 276 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 IGHEP01854 428 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 ANXA7P20073 488 aaKnown RBP12.16□□□□□ -0.46
THBS3-202ENST00000428962 C4BPBP20851 252 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 SDHBP21912 280 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 GNALP38405 381 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 FOLR3P41439 243 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 GNG2P59768 71 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 RAP2BP61225 183 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 TRIM61Q5EBN2 209 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CFAP77Q6ZQR2 320 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 TMPPEQ6ZT21 453 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 BIVMQ86UB2 503 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 SLC22A24Q8N4F4 322 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 TMEM229BQ8NBD8 167 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CLEC1AQ8NC01 280 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OR8H1Q8NGG4 311 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OR5D14Q8NGL3 314 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 ANGPTL4Q9BY76 406 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 SLC23A1Q9UHI7 598 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 RAB22AQ9UL26 194 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms