RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NUDCD3Q8IVD9 361 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PDIK1LQ8N165 341 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CENPSQ8N2Z9 138 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TCEANCQ8N8B7 351 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR5AR1Q8NGP9 310 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR6Q1Q8NGQ2 317 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 FLVCR1-AS1Q8TAF5 88 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 BLOC1S5Q8TDH9 187 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TNFRSF14Q92956 283 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PTP4A1Q93096 173 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 MARC2Q969Z3 335 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TADA1Q96BN2 335 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 BTBD9Q96Q07 612 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TTYH2Q9BSA4 534 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 THUMPD3Q9BV44 507 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 BCL2L14Q9BZR8 327 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PLEKHF2Q9H8W4 249 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 MID1IP1Q9NPA3 183 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 FGFR1OP2Q9NVK5 253 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TAS2R1Q9NYW7 299 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF107Q9UII5 783 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 EIF3LQ9Y262 564 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 GMPPBQ9Y5P6 360 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZANQ9Y493 2812 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRAV24A0A0B4J272 114 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 GNG14A0A1W2PPG7 69 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 C12orf71A8MTZ7 269 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 LINC00587B1AMM8 73 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 E5RI56 91 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 H0Y8G0 127 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CLDN4O14493 209 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ACOX3O15254 700 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CST8O60676 142 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DNAJB6O75190 326 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 BCAS1O75363 584 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CLPXO76031 633 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 PNPP00491 289 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 FTH1P02794 183 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 NR2F1P10589 423 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 COX5BP10606 129 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 S100PP25815 95 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR3A3P47888 321 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 MEOX2P50222 304 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RAB13P51153 203 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 P2RY4P51582 365 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RIDAP52758 137 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ACTR3P61158 418 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 VSNL1P62760 191 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRA2BP62995 288 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDK16Q00536 496 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC25A11Q02978 314 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 PTK6Q13882 451 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DGCR6Q14129 220 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM53BQ14153 422 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DPYSL3Q14195 570 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 LTB4RQ15722 352 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 NDUFA9Q16795 377 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DUSP7Q16829 419 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 TMEM44Q2T9K0 475 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ARMCX4Q5H9R4 360 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 LIPNQ5VXI9 398 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 SULT1C3Q6IMI6 304 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DHRS4L2Q6PKH6 230 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CENPVQ7Z7K6 275 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 LHFPL3Q86UP9 236 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RPS19BP1Q86WX3 136 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ERI1Q8IV48 349 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 CTAGE3PQ8IX95 158 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 UBE2J2Q8N2K1 259 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 LRTM2Q8N967 370 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 Q8NFD4 153 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR4K2Q8NGD2 314 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ST7LQ8TDW4 575 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DNAJA4Q8WW22 397 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC13A3Q8WWT9 602 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RNASE6Q93091 150 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RERGQ96A58 199 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAF2Q96CS3 445 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 OTUB1Q96FW1 271 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 MUS81Q96NY9 551 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RNF157Q96PX1 679 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 VAT1Q99536 393 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 NRTNQ99748 197 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF251Q9BRH9 671 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 HES7Q9BYE0 225 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DDX47Q9H0S4 455 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 OPN3Q9H1Y3 402 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 PPA2Q9H2U2 334 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR51B6Q9H340 312 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 NARFLQ9H6Q4 476 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DCLRE1BQ9H816 532 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 DNAJC4Q9NNZ3 241 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC9A8Q9Y2E8 581 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 UTP11Q9Y3A2 253 aaKnown RBP3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 KLK4Q9Y5K2 254 aa3.7□□□□□ -1.82
HMGB3P5-201ENST00000428894 FKBP7Q9Y680 259 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms