RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 ERMAPQ96PL5 475 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-202ENST00000428361 NTN4Q9HB63 628 aa13.08□□□□□ -0.32
CTDSP1-202ENST00000428361 STARD10Q9Y365 291 aa13.08□□□□□ -0.32
CTDSP1-202ENST00000428361 TRBV4-1A0A0J9YWV2 114 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 OR10H3O60404 316 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 VENTXO95231 258 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 SBK2P0C263 348 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 FPR3P25089 353 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 BTG1P62324 171 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 RFX4Q33E94 735 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 TMEM255AQ5JRV8 349 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 RPL13AP3Q6NVV1 102 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 RBMS3Q6XE24 437 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 TSEN54Q7Z6J9 526 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 C1orf87Q8N0U7 546 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 PGAM4Q8N0Y7 254 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 FAM216AQ8WUB2 273 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 POP5Q969H6 163 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 ZMYND19Q96E35 227 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 CDADC1Q9BWV3 514 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 HCAR1Q9BXC0 346 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 PATZ1Q9HBE1 687 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 NOP16Q9Y3C1 178 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-202ENST00000428361 LRRC30A6NM36 301 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 RER1O15258 196 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 SNX3O60493 162 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 PPP1R3DO95685 299 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 FABP3P05413 133 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 LCN2P80188 198 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 COX10Q12887 443 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 MALLQ13021 153 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 SEC23BQ15437 767 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 LEG1Q6P5S2 330 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 C16orf89Q6UX73 402 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 PTCHD4Q6ZW05 846 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 LINC00471Q8N535 108 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 ATG16L2Q8NAA4 619 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 OR8G5Q8NG78 346 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 OR52L1Q8NGH7 329 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 MRI1Q9BV20 369 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 IFT27Q9BW83 186 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 OR52D1Q9H346 318 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 KCNG2Q9UJ96 466 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 POLR3KQ9Y2Y1 108 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-202ENST00000428361 KRT36O76013 467 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 HLA-DQA2P01906 255 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 ADRA2CP18825 462 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 CDKN2AP42771 156 aaKnown RBP13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 MNAT1P51948 309 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 HIST1H3AP68431 136 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 HIST2H3PS2Q5TEC6 136 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 C1orf229Q6ZS94 237 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 HIST2H3AQ71DI3 136 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 RNF148Q8N7C7 305 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 GNPDA2Q8TDQ7 276 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 ITLN1Q8WWA0 313 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 PITX2Q99697 317 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 GPA33Q99795 319 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 FUZQ9BT04 418 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 OR5V1Q9UGF6 321 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 B9D1Q9UPM9 204 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 V9GYQ6 96 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 ANK2Q01484 3957 aa13.05□□□□□ -0.32
CTDSP1-202ENST00000428361 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 A8MXK9 166 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 DCTN3O75935 186 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 DIRAS1O95057 198 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 FSTL3O95633 263 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 IRF2P14316 349 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 COMPP49747 757 aaPredicted RBP13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 FXYD6P3P58550 94 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 Q6ZR03 302 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 FAM86B1Q8N7N1 296 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 SLC7A6Q92536 515 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 ERGIC1Q969X5 290 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 PLEKHA8Q96JA3 519 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 NMNAT3Q96T66 252 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 ATF6BQ99941 703 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
CTDSP1-202ENST00000428361 ZMAT3Q9HA38 289 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms