RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PLPP2O43688 288 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 HIST1H3AP68431 136 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 TSPAN31Q12999 210 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 HLXQ14774 488 aaPredicted RBP15.57■□□□□ 0.08
PSPC1-202ENST00000427943 CLEC12AQ5QGZ9 265 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 HIST2H3PS2Q5TEC6 136 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 FAHD2BQ6P2I3 314 aaPredicted RBP15.57■□□□□ 0.08
PSPC1-202ENST00000427943 PGM2L1Q6PCE3 622 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 SHQ1Q6PI26 577 aaKnown RBP15.57■□□□□ 0.08
PSPC1-202ENST00000427943 CFAP77Q6ZQR2 320 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 HIST2H3AQ71DI3 136 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 GJC3Q8NFK1 279 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 SLC26A10Q8NG04 563 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 FAHD2AQ96GK7 314 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 COG8Q96MW5 612 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 BTBD10Q9BSF8 475 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 HDHD2Q9H0R4 259 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 UBAP1Q9NZ09 502 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 ACTR3BQ9P1U1 418 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 ATPIF1Q9UII2 106 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 LYVE1Q9Y5Y7 322 aa15.57■□□□□ 0.08
PSPC1-202ENST00000427943 OR6C68A6NDL8 312 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 B2RBV5 119 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TNFRSF11BO00300 401 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TCF21O43680 179 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 PNPP00491 289 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 ANPEPP15144 967 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TUBG1P23258 451 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TNFSF4P23510 183 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 RGS6P49758 472 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.56■□□□□ 0.08
PSPC1-202ENST00000427943 SLC3A1Q07837 685 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 COX10Q12887 443 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 PPP1R8Q12972 351 aaKnown RBP15.56■□□□□ 0.08
PSPC1-202ENST00000427943 SPATS1Q496A3 300 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 RFLNBQ8N5W9 214 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 OR52E2Q8NGJ4 325 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 ITLN1Q8WWA0 313 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 HAVCR1Q96D42 359 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 DCLRE1CQ96SD1 692 aaKnown RBP15.56■□□□□ 0.08
PSPC1-202ENST00000427943 CCT8L2Q96SF2 557 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 COQ7Q99807 217 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 G6PC2Q9NQR9 355 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TUBG2Q9NRH3 451 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 METRNQ9UJH8 293 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 FBN3Q75N90 2809 aa15.56■□□□□ 0.08
PSPC1-202ENST00000427943 TCRBV5S2A0A599 114 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 HLA-DQA2P01906 255 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 RAC2P15153 192 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 MNAT1P51948 309 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 PRSS12P56730 875 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 SLC18B1Q6NT16 456 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 PEG10Q86TG7 708 aaKnown RBP15.55■□□□□ 0.08
PSPC1-202ENST00000427943 ZBTB46Q86UZ6 589 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 OR52L1Q8NGH7 329 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 PTP4A1Q93096 173 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 PLA2G12AQ9BZM1 189 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 OCEL1Q9H607 264 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 WDR76Q9H967 626 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 TMEM106BQ9NUM4 274 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 NPTNQ9Y639 398 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 CDH10Q9Y6N8 788 aa15.55■□□□□ 0.08
PSPC1-202ENST00000427943 LOC105371242A0A075B767 164 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 J3QW42 95 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 AVPP01185 164 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 IGHV2-70P01814 119 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 PYCR1P32322 319 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 MAGEA2P43356 314 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 SLC36A3Q495N2 470 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 LIPNQ5VXI9 398 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 OR2T2Q6IF00 324 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 FBXW12Q6X9E4 464 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 C1orf229Q6ZS94 237 aaPredicted RBP15.54■□□□□ 0.08
PSPC1-202ENST00000427943 CYB561A3Q8NBI2 242 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 OR10AD1Q8NGE0 317 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 OR4C15Q8NGM1 316 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 OR8D4Q8NGM9 314 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 APOBEC3DQ96AK3 386 aaPredicted RBP15.54■□□□□ 0.08
PSPC1-202ENST00000427943 NSL1Q96IY1 281 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 OR2V2Q96R30 315 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 PITX2Q99697 317 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 MRPL22Q9NWU5 206 aaKnown RBP15.54■□□□□ 0.08
PSPC1-202ENST00000427943 VNN3Q9NY84 501 aa15.54■□□□□ 0.08
PSPC1-202ENST00000427943 BHLHE40O14503 412 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 IDH3BO43837 385 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 RGS9O75916 674 aaPredicted RBP15.53■□□□□ 0.08
PSPC1-202ENST00000427943 KRT36O76013 467 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 CCNB2O95067 398 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 SBK2P0C263 348 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 TNFRSF1AP19438 455 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 RPS27P42677 84 aaKnown RBP15.53■□□□□ 0.08
PSPC1-202ENST00000427943 HMGA2P52926 109 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 LCN2P80188 198 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 RSPO1Q2MKA7 263 aaPredicted RBP15.53■□□□□ 0.08
PSPC1-202ENST00000427943 DCAF12L2Q5VW00 463 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 LCN8Q6JVE9 175 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 ATG16L2Q8NAA4 619 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 BHLHE23Q8NDY6 225 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 OR5L1Q8NGL2 311 aa15.53■□□□□ 0.08
PSPC1-202ENST00000427943 OR2AJ1Q8NGZ0 328 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms