RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CMSS1Q9BQ75 279 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 FAM117AQ9C073 453 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ELOVL3Q9HB03 270 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 IGKV3D-11A0A0A0MRZ8 115 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 TMED7-TICAM2A0A0A6YYA0 188 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR4C45A6NMZ5 311 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 NUDT21O43809 227 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 EIF4E2O60573 245 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 SLC16A7O60669 478 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 MPZL1O95297 269 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 IGF2P01344 180 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 CALCBP10092 127 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 GTF2F2P13984 249 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 AP3S2P59780 193 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 FGL1Q08830 312 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR10K2Q6IF99 312 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 SFT2D1Q8WV19 159 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ADAM19Q9H013 955 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR51M1Q9H341 326 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 UBE2ZQ9H832 354 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 TMED7Q9Y3B3 224 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 DCDC2BA2VCK2 349 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 EIF1AYO14602 144 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 BCAT2O15382 392 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 AHSA1O95433 338 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 WNT11O96014 354 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ITGA5P08648 1049 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR2B11Q5JQS5 317 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF627Q7L945 461 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OR51S1Q8NGJ8 323 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 GPR148Q8TDV2 347 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 MESP1Q9BRJ9 268 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 CHRNA10Q9GZZ6 450 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 OPN3Q9H1Y3 402 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 KIF25Q9UIL4 384 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ALG1L2C9J202 215 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 SOX1O00570 391 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 GOSR2O14653 212 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 RAB40ALP0C0E4 278 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 GLB1P16278 677 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 EIF1AXP47813 144 aaKnown RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 AFF3P51826 1226 aaKnown RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 POLR2HP52434 150 aaKnown RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 SEC61A1P61619 476 aaKnown RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 ACKR1Q16570 336 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 WDR38Q5JTN6 314 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 GPR119Q8TDV5 335 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TNFAIP8L1Q8WVP5 186 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 RAB40AQ8WXH6 277 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 CGGBP1Q9UFW8 167 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 CTAG2O75638 210 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TXNDC12O95881 172 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 OPN1LWP04000 364 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 PRF1P14222 555 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 BCKDHBP21953 392 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 PNLIPRP2P54317 469 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 CFHR1Q03591 330 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TMEM205Q6UW68 189 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF227Q86WZ6 799 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 D2HGDHQ8N465 521 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 PNPLA2Q96AD5 504 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 NUDT22Q9BRQ3 303 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TGIF2Q9GZN2 237 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 ATG5Q9H1Y0 275 aa11.65□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF230Q9UIE0 474 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-205ENST00000425443 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 CPED1A4D0V7 1026 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 H7C417 338 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 SLC31A2O15432 143 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 TXNL1O43396 289 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 ALOX5APP20292 161 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 ZP3P21754 424 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 CSF2RBP32927 897 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 ADAM8P78325 824 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 FAM189A2Q15884 450 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 C1orf140Q5VVS0 124 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 B3GNTL1Q67FW5 361 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-205ENST00000425443 MTFP1Q9UDX5 166 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 TMEM212A6NML5 194 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 PHYHO14832 338 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 XRCC3O43542 346 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 TSPAN2O60636 221 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 BGLAPP02818 100 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 CD3DP04234 171 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 IL5P05113 134 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 RAP2BP61225 183 aa11.64□□□□□ -0.55
COL12A1-205ENST00000425443 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
COL12A1-205ENST00000425443 EID2Q8N6I1 236 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms