RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TIMM10BQ9Y5J6 103 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 IGHV3OR15-7A0A075B7D8 119 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 A6NLC8 198 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 PLPP3O14495 311 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 LDLRAD4O15165 306 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 PEX11AO75192 247 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 LYPLA1O75608 230 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 HIST1H2ABP04908 130 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 SERPINE1P05121 402 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 SBK3P0C264 359 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 UMPSP11172 480 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 PRPS1L1P21108 318 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ECHS1P30084 290 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 MYCNOSP40205 109 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 RAB13P51153 203 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 BLCAPP62952 87 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 MRPS25P82663 173 aaKnown RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 CD47Q08722 323 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 SELPLGQ14242 412 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 AANATQ16613 207 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 C9orf152Q5JTZ5 239 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 FAM27D1Q5T7N8 215 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 AP1ARQ63HQ0 302 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 OR4F3Q6IEY1 312 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 CRIP3Q6Q6R5 217 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 HIST3H2AQ7L7L0 130 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 RANBP3LQ86VV4 465 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ANKRD46Q86W74 232 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 FNDC5Q8NAU1 212 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 KLHL30-AS1Q8NEE0 82 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 OR5L1Q8NGL2 311 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 OR2T11Q8NH01 316 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 OR6S1Q8NH40 331 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 MIPOL1Q8TD10 442 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ADAMTS16Q8TE57 1224 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 WIPF2Q8TF74 440 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 HIST1H2ACQ93077 130 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ERGIC1Q969X5 290 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 DUX3Q96PT4 197 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF347Q96SE7 839 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ECSITQ9BQ95 431 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 SLC35A5Q9BS91 424 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 SLC38A1Q9H2H9 487 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 MRPL39Q9NYK5 338 aaKnown RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 PRDM4Q9UKN5 801 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 TCF19Q9Y242 345 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF443Q9Y2A4 671 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-203ENST00000424270 STARD10Q9Y365 291 aa5.08□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PPL8 197 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PRG6 482 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 TMEM247A6NEH6 219 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 LRRN3E7EW58 273 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 HMGN4O00479 90 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 AZIN1O14977 448 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 DOK2O60496 412 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 SLC2A10O95528 541 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 LPLP06858 475 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 PGA4P0DJD7 388 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 PGA3P0DJD8 388 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 MYL2P10916 166 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 ETS2P15036 469 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 RAC2P15153 192 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 COX7A1P24310 79 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 LAP3P28838 519 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 SERPINB9P50453 376 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 PLTPP55058 493 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 SLC7A5Q01650 507 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 NFYCQ13952 458 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 OR8G1Q15617 311 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 C11orf91Q3C1V1 193 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF260Q3ZCT1 412 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 LRRC10Q5BKY1 277 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 BEND6Q5SZJ8 279 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-203ENST00000424270 HHATQ5VTY9 493 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 ETV3LQ6ZN32 361 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 Q6ZS46 218 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 SLC36A1Q7Z2H8 476 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 SLC30A8Q8IWU4 369 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 C10orf111Q8N326 155 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CLIP4Q8N3C7 705 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 FGFRL1Q8N441 504 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CCDC63Q8NA47 563 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 NOXO1Q8NFA2 376 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 OR5D13Q8NGL4 314 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 OR5J2Q8NH18 312 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 COQ8BQ96D53 544 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 RNFT2Q96EX2 444 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 LYZL4Q96KX0 146 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 FCRL1Q96LA6 429 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 PPP3R2Q96LZ3 170 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 MOGAT1Q96PD6 335 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CDRT15Q96T59 188 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CCL13Q99616 98 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 HCAR1Q9BXC0 346 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 WNT5BQ9H1J7 359 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 TNFRSF12AQ9NP84 129 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 C20orf141Q9NUB4 165 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 C1orf123Q9NWV4 160 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CALML5Q9NZT1 146 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms